C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: general transcription factor IIA, 1-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024154 Gtf2a1l 10090 + 17:88668660-88715152 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000024970 Gtf2a1l-001 88668660-88715152 protein_coding
  ENSMUST00000161481 Gtf2a1l-002 88668696-88694586 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000024970ENSMUST00000161481
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000024970 0.039±0.00 0.014±0.00 0.063±0.02 0.043±0.01 0.069±0.05 0.060±0.04 0.049±0.03 0.018±0.00 0.024±0.00 0.763±0.30 0.058±0.02 142.393±39.38
ENSMUST00000161481 0.158±0.00 N/A 0.418±0.00 0.040±0.00 0.070±0.00 0.026±0.00 N/A 0.009±0.00 N/A 0.250±0.01 0.258±0.14 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003LN CIL_0003LN_0002 CGP 17:88597684-88715152
CIL_0003LM CIL_0003LM_0002 CGP 17:88668660-88791976

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005672 IDA transcription factor TFIIA complex
GO:0005737 IDA cytoplasm
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006367 IEA transcription initiation from RNA polymerase II promoter
GO:0050890 IEA cognition

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000242441 GTF2A1L general transcription factor IIA, 1-like protein_coding Homo_sapiens

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