C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tetratricopeptide repeat domain 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000243725 TTC4 9606 + 1:54715822-54742657 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000371281 TTC4-001 54715822-54742657 protein_coding
  ENST00000371284 TTC4-002 54715868-54742307 processed_transcript
  ENST00000486091 TTC4-003 54736689-54742307 retained_intron
  ENST00000486621 TTC4-004 54715865-54717767 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000371281ENST00000371284
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000371281 N/A N/A 1.661±0.54 N/A 2.719±0.00 1.447±0.00 1.722±0.00 N/A 1.345±0.73 6.153±0.00 5.854±4.63 3.485±1.69 N/A
ENST00000371284 6.412±0.00 10.271±0.00 6.091±0.00 9.159±0.00 5.857±0.00 2.894±0.00 7.113±0.00 3.285±1.86 2.374±0.00 7.584±0.00 6.108±2.11 5.405±2.38 17.666±4.62

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00085J CIL_00085J_0001 VISTA 1:54159373-54763153
CIL_00005C CIL_00005C_0002 CGP 1:54715822-54764514

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044405 ttc4 tetratricopeptide repeat domain 4 protein_coding Danio_rerio
ENSMUSG00000025413 Ttc4 tetratricopeptide repeat domain 4 protein_coding Mus_musculus

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