C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tetratricopeptide repeat domain 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025413 Ttc4 10090 - 4:106662256-106678944 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000026480 Ttc4-001 106662256-106678944 protein_coding
  ENSMUST00000106772 Ttc4-008 106663064-106678866 protein_coding
  ENSMUST00000127133 Ttc4-005 106667644-106671683 processed_transcript
  ENSMUST00000127571 Ttc4-003 106671738-106678901 processed_transcript
  ENSMUST00000132572 Ttc4-004 106676290-106678889 processed_transcript
  ENSMUST00000132650 Ttc4-007 106662433-106667547 processed_transcript
  ENSMUST00000135676 Ttc4-009 106670463-106678891 protein_coding
  ENSMUST00000139687 Ttc4-006 106668147-106671031 processed_transcript
  ENSMUST00000142342 Ttc4-002 106662260-106678686 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026480ENSMUST00000106772ENSMUST00000127133ENSMUST00000132650ENSMUST00000135676ENSMUST00000142342
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026480 13.884±3.53 8.473±3.97 11.649±0.05 14.263±6.90 11.394±1.29 11.986±3.39 8.491±0.40 14.123±1.63 11.747±2.89 8.538±1.62 15.070±1.42 11.792±5.15 18.175±5.06 11.504±0.89
ENSMUST00000106772 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 40.502±0.00
ENSMUST00000127133 8.746±3.00 7.993±1.52 7.336±0.00 N/A 7.225±1.48 7.206±0.77 3.574±0.00 N/A 5.523±0.57 N/A N/A 9.772±1.69 N/A N/A
ENSMUST00000132650 6.952±2.69 N/A 11.449±0.00 N/A 7.451±3.00 5.611±0.00 N/A N/A 9.262±2.51 N/A N/A 8.851±1.17 N/A N/A
ENSMUST00000135676 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 37.357±0.00
ENSMUST00000142342 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.547±1.67 N/A 44.262±14.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00085J CIL_00085J_0002 VISTA 4:106564211-107167561

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044405 ttc4 tetratricopeptide repeat domain 4 protein_coding Danio_rerio
ENSG00000243725 TTC4 tetratricopeptide repeat domain 4 protein_coding Homo_sapiens

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