C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetratricopeptide repeat domain 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371284 TTC4-002 ENSG00000243725 9606 + 1:54715868-54742307 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000371284
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000371284 6.412±0.00 10.271±0.00 6.091±0.00 9.159±0.00 5.857±0.00 2.894±0.00 7.113±0.00 3.285±1.86 2.374±0.00 7.584±0.00 6.108±2.11 5.405±2.38 17.666±4.62

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00085J CIL_00085J_0001 VISTA 1:54159373-54763153
CIL_00005C CIL_00005C_0002 CGP 1:54715822-54764514

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000142342 Ttc4-002 processed_transcript Mus_musculus 0 1096
ENSMUST00000026480 Ttc4-001 protein_coding Mus_musculus 0 1096
ENSMUST00000106772 Ttc4-008 protein_coding Mus_musculus 0 654
ENSMUST00000135676 Ttc4-009 protein_coding Mus_musculus 0 407
ENSMUST00000132572 Ttc4-004 processed_transcript Mus_musculus 0 340
ENSMUST00000127571 Ttc4-003 processed_transcript Mus_musculus 2e-37 161

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