C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetratricopeptide repeat domain 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371281 TTC4-001 ENSG00000243725 9606 + 1:54715822-54742657 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartKidneyLungMuscleOvaryPlacentaENST00000371281
Transcript ID Brain Colon Heart Kidney Lung Muscle Ovary Placenta
ENST00000371281 1.661±0.54 2.719±0.00 1.447±0.00 1.722±0.00 1.345±0.73 6.153±0.00 5.854±4.63 3.485±1.69

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00085J CIL_00085J_0001 VISTA 1:54159373-54763153
CIL_00005C CIL_00005C_0002 CGP 1:54715822-54764514

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026480 Ttc4-001 protein_coding Mus_musculus 0 1182
ENSMUST00000142342 Ttc4-002 processed_transcript Mus_musculus 0 1099
ENSMUST00000106772 Ttc4-008 protein_coding Mus_musculus 0 741
ENSMUST00000135676 Ttc4-009 protein_coding Mus_musculus 0 494
ENSMUST00000132572 Ttc4-004 processed_transcript Mus_musculus 0 427
ENSMUST00000127571 Ttc4-003 processed_transcript Mus_musculus 0 248

Loading