C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: complement factor H-related 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000244414 CFHR1 9606 + 1:196819757-196832189 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000320493 CFHR1-001 196819757-196832189 protein_coding
  ENST00000367424 CFHR1-002 196819781-196832189 protein_coding
  ENST00000468079 CFHR1-006 196819865-196826026 retained_intron
  ENST00000472961 CFHR1-003 196819822-196821202 processed_transcript
  ENST00000480960 CFHR1-005 196825224-196828167 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000320493ENST00000367424ENST00000468079ENST00000472961
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000320493 0.008±0.00 1.892±0.00 0.080±0.00 0.084±0.00 0.156±0.15 0.170±0.00 0.116±0.00 105.830±105.58 214.553±0.00 N/A N/A 0.153±0.14 N/A N/A
ENST00000367424 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.038±0.00 0.099±0.04
ENST00000468079 N/A N/A N/A N/A 0.622±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472961 N/A N/A 0.522±0.00 0.053±0.00 0.048±0.00 0.163±0.03 0.439±0.00 N/A 1.090±0.00 0.456±0.00 0.771±0.00 0.575±0.00 0.171±0.00 0.575±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001M0 CIL_0001M0_0005 CGP 1:196774795-196959210
CIL_0001M0 CIL_0001M0_0009 CGP 1:196819745-196959210
CIL_0001M0 CIL_0001M0_0008 CGP 1:196819757-196918972

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005615 TAS extracellular space
GO:0006956 TAS complement activation
GO:0070062 IDA extracellular vesicular exosome
GO:0072562 IDA blood microparticle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000091868 f13b coagulation factor XIII, B polypeptide protein_coding Danio_rerio
ENSDARG00000092786 cfhl5 complement factor H like 5 protein_coding Danio_rerio
ENSDARG00000094496 cfhl4 complement factor H like 4 protein_coding Danio_rerio
ENSMUSG00000026365 Cfh complement component factor h protein_coding Mus_musculus
ENSMUSG00000033898 Cfhr2 complement factor H-related 2 protein_coding Mus_musculus
ENSMUSG00000057037 Cfhr1 complement factor H-related 1 protein_coding Mus_musculus
ENSMUSG00000070594 Gm4788 predicted gene 4788 protein_coding Mus_musculus

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