C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: complement factor H-related 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000320493 CFHR1-001 ENSG00000244414 9606 + 1:196819757-196832189 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverOvaryENST00000320493
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Ovary
ENST00000320493 0.008±0.00 1.892±0.00 0.080±0.00 0.084±0.00 0.156±0.15 0.170±0.00 0.116±0.00 105.830±105.58 214.553±0.00 0.153±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001M0 CIL_0001M0_0005 CGP 1:196774795-196959210
CIL_0001M0 CIL_0001M0_0009 CGP 1:196819745-196959210
CIL_0001M0 CIL_0001M0_0008 CGP 1:196819757-196918972

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005615 TAS extracellular space
GO:0006956 TAS complement activation
GO:0070062 IDA extracellular vesicular exosome
GO:0072562 IDA blood microparticle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023965 Cfhr1-001 protein_coding Mus_musculus 2e-31 141
ENSMUST00000161224 Cfhr1-003 retained_intron Mus_musculus 5e-27 126

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