C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: formin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000334528 FMN1-001 ENSG00000248905 9606 - 15:32765546-33067884 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLungMuscleOvaryPlacentaENST00000334528
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Lung Muscle Ovary Placenta
ENST00000334528 0.148±0.00 0.091±0.00 0.196±0.00 2.620±0.00 0.105±0.00 0.341±0.00 0.443±0.00 0.102±0.05 0.606±0.38 0.562±0.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097N CIL_00097N_0001 VISTA 15:32499326-33100458

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005884 IEA actin filament
GO:0005886 IEA plasma membrane
GO:0030054 IEA cell junction
GO:0045010 IEA actin nucleation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000185668 Fmn1-002 processed_transcript Mus_musculus 0 3173
ENSMUST00000081349 FMN1-201 protein_coding Mus_musculus 0 3158
ENSMUST00000099576 Fmn1-201 protein_coding Mus_musculus 0 2355
ENSMUST00000161731 Fmn1-008 protein_coding Mus_musculus 0 2187
ENSMUST00000102547 Fmn1-001 protein_coding Mus_musculus 0 1581
ENSMUST00000152255 Fmn1-004 processed_transcript Mus_musculus 0 505
ENSMUST00000145891 Fmn1-006 processed_transcript Mus_musculus 0 505
ENSMUST00000150510 Fmn1-007 processed_transcript Mus_musculus 0 291
ENSMUST00000153151 Fmn1-005 processed_transcript Mus_musculus 0.0000000000003 84
ENSMUST00000159255 Mettl13-002 retained_intron Mus_musculus 0.0002 55

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