C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CHKB-CPT1B readthrough (NMD candidate)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000254413 CHKB-CPT1B 9606 - 22:50568869-50582965 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000452668 CHKB-CPT1B-002 50577819-50579999 processed_transcript
  ENST00000453634 CHKB-CPT1B-001 50568995-50579752 nonsense_mediated_decay
  ENST00000492556 CHKB-CPT1B-003 50568869-50582965 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyLungMusclePlacentaENST00000453634ENST00000492556
Transcript ID Kidney Lung Muscle Placenta
ENST00000453634 4.684±0.00 N/A 3.654±0.00 N/A
ENST00000492556 N/A 0.212±0.00 N/A 1.334±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00028I CIL_00028I_0001 CGP 22:50551112-50578465
CIL_0002HR CIL_0002HR_0001 CGP 22:50568861-50582965

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063167 chkb choline kinase beta protein_coding Danio_rerio
ENSMUSG00000022617 Chkb choline kinase beta protein_coding Mus_musculus

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