C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00028I_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000217442-ENSG00000205560 CGP 9606 22:50551112-50578465
GeneTranscriptPositionBiotype
ENSG00000205560 (CPT1B)
carnitine palmitoyltransferase 1B (muscle) 		ENST00000312108 (CPT1B-004) 50568862-50578417 protein_coding
ENST00000360719 (CPT1B-201) 50569338-50577915 protein_coding
ENST00000395650 (CPT1B-001) 50569084-50578455 protein_coding
ENST00000405237 (CPT1B-005) 50568861-50578020 protein_coding
ENST00000417176 (CPT1B-008) 50576940-50578246 protein_coding
ENST00000423069 (CPT1B-020) 50572875-50576064 nonsense_mediated_decay
ENST00000457250 (CPT1B-202) 50569338-50577915 protein_coding
ENST00000460853 (CPT1B-007) 50576626-50578465 retained_intron
ENST00000461117 (CPT1B-009) 50576707-50577868 retained_intron
ENST00000475238 (CPT1B-013) 50571883-50573100 retained_intron
ENST00000476790 (CPT1B-010) 50576056-50576903 retained_intron
ENST00000479886 (CPT1B-011) 50574365-50574982 retained_intron
ENST00000497224 (CPT1B-014) 50570348-50572297 retained_intron
ENSG00000217442 (SYCE3)
synaptonemal complex central element protein 3 		ENST00000402753 (SYCE3-001) 50551197-50556432 protein_coding
ENST00000406915 (SYCE3-002) 50551112-50562905 protein_coding
CIL_00028I_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000078938-ENSMUSG00000078937 CGP 10090 15:89390174-89425863
GeneTranscriptPositionBiotype
ENSMUSG00000022617 (Chkb)
choline kinase beta 		ENSMUST00000023289 (Chkb-001) 89426367-89429899 protein_coding
ENSMUST00000052315 (Chkb-002) 89416405-89429696 retained_intron
ENSMUST00000112664 (Chkb-010) 89426360-89427161 processed_transcript
ENSMUST00000115278 (Chkb-006) 89426468-89427159 retained_intron
ENSMUST00000165623 (Chkb-005) 89427115-89429908 retained_intron
ENSMUST00000166267 (Chkb-007) 89427380-89429430 retained_intron
ENSMUST00000170334 (Chkb-003) 89426360-89429860 retained_intron
ENSMUST00000170460 (Chkb-009) 89427635-89429093 protein_coding
ENSMUST00000171140 (Chkb-004) 89426367-89429439 retained_intron
ENSMUST00000171666 (Chkb-008) 89426441-89428493 nonsense_mediated_decay
ENSMUSG00000078937 (Cpt1b)
carnitine palmitoyltransferase 1b, muscle 		ENSMUST00000109313 (Cpt1b-001) 89416405-89425863 protein_coding
ENSMUST00000165419 (Cpt1b-003) 89423764-89424471 retained_intron
ENSMUST00000168376 (Cpt1b-002) 89424836-89425795 protein_coding
ENSMUST00000168879 (Cpt1b-004) 89418765-89421401 nonsense_mediated_decay
ENSMUSG00000078938 (Syce3)
synaptonemal complex central element protein 3 		ENSMUST00000109314 (Syce3-002) 89390174-89410263 protein_coding
ENSMUST00000167959 (Syce3-001) 89390174-89410503 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00028I_0001ENSG00000205560ENST00000312108ENST00000360719ENST00000395650ENST00000405237ENST00000417176ENST00000423069ENST00000457250ENST00000460853ENST00000461117ENST00000475238ENST00000476790ENST00000479886ENST00000497224ENSG00000217442ENST00000402753ENST00000406915CIL_00028I_0002ENSMUSG00000022617ENSMUST00000023289ENSMUST00000052315ENSMUST00000112664ENSMUST00000115278ENSMUST00000165623ENSMUST00000166267ENSMUST00000170334ENSMUST00000170460ENSMUST00000171140ENSMUST00000171666ENSMUSG00000078937ENSMUST00000109313ENSMUST00000165419ENSMUST00000168376ENSMUST00000168879ENSMUSG00000078938ENSMUST00000109314ENSMUST00000167959
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00028I_0001ENSG00000205560ENST00000312108ENST00000360719ENST00000395650ENST00000405237ENST00000423069ENST00000457250ENST00000497224ENSG00000217442ENST00000402753ENST00000406915CIL_00028I_0002ENSMUSG00000022617ENSMUST00000023289ENSMUST00000165623ENSMUST00000170334ENSMUST00000171140ENSMUST00000171666ENSMUSG00000078937ENSMUST00000109313ENSMUSG00000078938ENSMUST00000109314ENSMUST00000167959
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000205560 ENST00000312108 N/A N/A N/A 0.329±0.00 N/A 1.817±0.00 80.006±73.53 N/A N/A N/A 20.696±13.73 0.377±0.00 2.629±0.12 N/A
ENST00000360719 1.990±0.00 N/A 0.519±0.00 N/A 1.060±0.00 N/A 9.860±0.00 N/A 1.046±0.00 N/A 16.005±5.98 N/A N/A 18.551±0.00
ENST00000395650 N/A N/A N/A 1.385±0.00 N/A 1.011±0.00 2.775±0.00 4.983±0.00 N/A N/A 14.104±0.00 N/A N/A N/A
ENST00000405237 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.317±0.00 N/A N/A N/A 42.142±16.38
ENST00000417176 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000423069 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.373±0.00 N/A N/A
ENST00000457250 N/A N/A 0.567±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460853 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475238 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476790 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479886 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497224 N/A N/A 1.493±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000217442 ENST00000402753 N/A 0.053±0.00 N/A N/A 0.133±0.00 N/A N/A N/A 0.149±0.00 N/A N/A 0.460±0.00 0.434±0.04 N/A
ENST00000406915 0.207±0.00 N/A 0.264±0.00 0.816±0.00 0.269±0.00 N/A 0.125±0.00 0.475±0.00 N/A 0.339±0.00 N/A 0.376±0.09 0.601±0.00 96.275±43.97
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022617 ENSMUST00000023289 11.710±1.54 15.116±4.87 10.842±2.62 9.569±0.59 8.682±0.00 14.345±5.63 N/A 13.678±3.30 7.822±2.19 10.622±1.25 N/A 12.102±3.25 8.875±2.01 N/A
ENSMUST00000052315 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000112664 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000115278 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165623 N/A N/A 3.677±0.46 4.270±0.05 N/A N/A N/A N/A N/A N/A N/A 2.935±0.00 N/A N/A
ENSMUST00000166267 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170334 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.863±0.00 N/A N/A
ENSMUST00000170460 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171140 12.299±2.70 N/A 12.779±0.52 8.380±1.91 11.600±4.54 14.340±1.19 N/A 13.477±3.85 7.560±1.83 11.680±1.86 N/A 14.101±6.74 10.884±3.07 N/A
ENSMUST00000171666 N/A N/A N/A 4.800±0.00 N/A N/A N/A N/A 14.445±0.00 N/A N/A 21.033±7.52 15.535±5.33 N/A
ENSMUSG00000078937 ENSMUST00000109313 11.735±4.79 21.271±8.44 N/A 3.537±0.26 29.298±24.89 N/A 199.626±17.91 21.927±3.12 7.299±7.11 8.263±2.43 113.534±8.38 N/A 3.618±0.66 82.774±28.00
ENSMUST00000165419 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168879 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000078938 ENSMUST00000109314 N/A N/A N/A N/A N/A 0.480±0.33 0.217±0.00 0.099±0.00 0.148±0.03 N/A 0.135±0.04 N/A 0.220±0.16 98.822±18.32
ENSMUST00000167959 N/A N/A N/A N/A N/A 0.401±0.01 N/A N/A N/A N/A N/A 0.396±0.00 N/A 17.942±3.21

Loading