C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | CHKB-CPT1B readthrough (NMD candidate) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000452668  |
CHKB-CPT1B-002 |
ENSG00000254413 |
9606 | - |
22:50577819-50579999  |
processed_transcript |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00028I | CIL_00028I_0001 | CGP | 22:50551112-50578465 |
| CIL_0002HR | CIL_0002HR_0001 | CGP | 22:50568861-50582965 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000115278
|
Chkb-006 | retained_intron | Mus_musculus | 6.99949e-42 | 174 |
|
ENSMUST00000171666
|
Chkb-008 | nonsense_mediated_decay | Mus_musculus | 6.99949e-42 | 174 |
|
ENSMUST00000023289
|
Chkb-001 | protein_coding | Mus_musculus | 6.99949e-42 | 174 |
|
ENSMUST00000171140
|
Chkb-004 | retained_intron | Mus_musculus | 6.99949e-42 | 174 |
|
ENSMUST00000170334
|
Chkb-003 | retained_intron | Mus_musculus | 6.99949e-42 | 174 |
|
ENSMUST00000112664
|
Chkb-010 | processed_transcript | Mus_musculus | 6.99949e-42 | 174 |
|
ENSMUST00000052315
|
Chkb-002 | retained_intron | Mus_musculus | 3e-40 | 169 |
|
ENSMUST00000168376
|
Cpt1b-002 | protein_coding | Mus_musculus | 2e-33 | 147 |
|
ENSMUST00000109313
|
Cpt1b-001 | protein_coding | Mus_musculus | 2e-32 | 143 |
