C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SYS1-DBNDD2 readthrough (NMD candidate)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000475242 SYS1-DBNDD2-004 ENSG00000254806 9606 + 20:45363216-45410007 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaENST00000475242
Transcript ID Ovary Placenta
ENST00000475242 100.288±0.00 27.174±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003L6 CIL_0003L6_0001 CGP 20:45363200-45410610

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000164863 Gm20458-001 nonsense_mediated_decay Mus_musculus 0 483
ENSMUST00000109349 Dbndd2-001 protein_coding Mus_musculus 0 381
ENSMUST00000143690 Dbndd2-004 protein_coding Mus_musculus 0 381
ENSMUST00000017878 Dbndd2-005 protein_coding Mus_musculus 0 374
ENSMUST00000069385 Dbndd2-002 protein_coding Mus_musculus 0 374
ENSMUST00000149287 Dbndd2-003 nonsense_mediated_decay Mus_musculus 0 374
ENSMUST00000109350 Dbndd2-006 protein_coding Mus_musculus 0 374

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