C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SYS1-DBNDD2 readthrough (NMD candidate)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000458187 SYS1-DBNDD2-002 ENSG00000254806 9606 + 20:45363502-45409997 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003L6 CIL_0003L6_0001 CGP 20:45363200-45410610

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000164863 Gm20458-001 nonsense_mediated_decay Mus_musculus 0 359
ENSMUST00000017878 Dbndd2-005 protein_coding Mus_musculus 0 359
ENSMUST00000109349 Dbndd2-001 protein_coding Mus_musculus 0 359
ENSMUST00000143690 Dbndd2-004 protein_coding Mus_musculus 0 359
ENSMUST00000069385 Dbndd2-002 protein_coding Mus_musculus 0 359
ENSMUST00000149287 Dbndd2-003 nonsense_mediated_decay Mus_musculus 0 359
ENSMUST00000109350 Dbndd2-006 protein_coding Mus_musculus 0 359
ENSMUST00000072452 Sys1-201 protein_coding Mus_musculus 0 337
ENSMUST00000125086 Sys1-004 nonsense_mediated_decay Mus_musculus 0 337
ENSMUST00000142892 Sys1-007 nonsense_mediated_decay Mus_musculus 0 337
ENSMUST00000138268 Sys1-003 nonsense_mediated_decay Mus_musculus 0 337
ENSMUST00000109352 Sys1-001 protein_coding Mus_musculus 0 337

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