C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000257522 RP11-562L8.1 9606 - 14:29264381-29381295 processed_transcript
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000548306 RP11-562L8.1-002 29274753-29381290 lincRNA
  ENST00000548665 RP11-562L8.1-005 29274723-29353802 lincRNA
  ENST00000550975 RP11-562L8.1-004 29264844-29378560 lincRNA
  ENST00000551040 RP11-562L8.1-003 29264381-29378656 antisense
  ENST00000551110 RP11-562L8.1-001 29267592-29381295 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartLiverLungMuscleTestisENST00000548306ENST00000548665ENST00000550975ENST00000551040ENST00000551110
Transcript ID Brain Colon Heart Liver Lung Muscle Testis
ENST00000548306 0.117±0.03 N/A N/A N/A N/A N/A N/A
ENST00000548665 N/A N/A 0.023±0.00 0.022±0.00 0.156±0.00 0.176±0.00 0.068±0.00
ENST00000550975 1.002±0.00 0.188±0.00 N/A N/A N/A N/A 0.089±0.00
ENST00000551040 N/A N/A N/A N/A N/A N/A 0.046±0.00
ENST00000551110 N/A N/A N/A N/A N/A N/A 0.153±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007MH CIL_0007MH_0001 UCNEbase 14:28763941-29529087
CIL_000887 CIL_000887_0001 VISTA 14:28844097-29445522
CIL_0008KH CIL_0008KH_0001 VISTA 14:28915690-29517538
CIL_000924 CIL_000924_0001 VISTA 14:28941679-29544134
CIL_0007XL CIL_0007XL_0001 VISTA 14:28974168-29576675
CIL_00099Q CIL_00099Q_0001 VISTA 14:29088724-29691342
CIL_0008M6 CIL_0008M6_0001 VISTA 14:29091323-29693142
CIL_00094H CIL_00094H_0001 VISTA 14:29124991-29726376
CIL_0008VR CIL_0008VR_0001 VISTA 14:29142114-29743308
CIL_00092M CIL_00092M_0001 VISTA 14:29158278-29759612
CIL_00095N CIL_00095N_0001 VISTA 14:29191285-29792799
CIL_0008C7 CIL_0008C7_0001 VISTA 14:29227965-29829685

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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