C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: polypeptide N-acetylgalactosaminyltransferase 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000257594 GALNT4 9606 - 12:89519408-89524806 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000529983 GALNT4-001 89519408-89524806 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000529983
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000529983 0.967±0.00 1.209±0.00 1.877±0.00 0.984±0.46 5.050±3.59 3.296±2.32 0.536±0.02 1.877±0.00 1.752±0.85 0.991±0.35 4.573±2.95 0.947±0.16 0.746±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000213 CIL_000213_0002 CGP 12:89347232-89526024
CIL_0002EZ CIL_0002EZ_0001 CGP 12:89419718-89526262

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0004653 IEA polypeptide N-acetylgalactosaminyltransferase activity
GO:0005794 IDA Golgi apparatus
GO:0005975 NAS carbohydrate metabolic process
GO:0016021 IEA integral component of membrane
GO:0016266 TAS O-glycan processing
GO:0030246 IEA carbohydrate binding
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0046872 IEA metal ion binding
GO:0048471 IDA perinuclear region of cytoplasm
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012745 poc1bl POC1 centriolar protein homolog B (Chlamydomonas), like protein_coding Danio_rerio
ENSMUSG00000090035 Galnt4 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 4 protein_coding Mus_musculus

Loading