C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002EZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000139323-ENSG00000259075 CGP 9606 12:89419718-89526262
GeneTranscriptPositionBiotype
ENSG00000139323 (POC1B)
POC1 centriolar protein B 		ENST00000313546 (POC1B-001) 89419718-89526024 protein_coding
ENST00000393179 (POC1B-007) 89419718-89525615 protein_coding
ENST00000539190 (POC1B-006) 89460710-89525993 retained_intron
ENST00000546740 (POC1B-016) 89420787-89461842 processed_transcript
ENST00000546830 (POC1B-009) 89492075-89526000 nonsense_mediated_decay
ENST00000547274 (POC1B-010) 89485269-89526020 nonsense_mediated_decay
ENST00000547496 (POC1B-002) 89421154-89526000 nonsense_mediated_decay
ENST00000548715 (POC1B-011) 89425167-89525997 nonsense_mediated_decay
ENST00000549035 (POC1B-005) 89420896-89525563 protein_coding
ENST00000549304 (POC1B-014) 89459671-89472695 processed_transcript
ENST00000549504 (POC1B-013) 89425287-89525205 protein_coding
ENST00000549591 (POC1B-008) 89419718-89429460 retained_intron
ENST00000551819 (POC1B-015) 89466673-89470405 retained_intron
ENST00000552563 (POC1B-012) 89466768-89525415 retained_intron
ENSG00000226982 (CENPCP1)
centromere protein C pseudogene 1 		ENST00000533085 (CENPCP1-001) 89500093-89502670 processed_pseudogene
ENSG00000257594 (GALNT4)
polypeptide N-acetylgalactosaminyltransferase 4 		ENST00000529983 (GALNT4-001) 89519408-89524806 protein_coding
ENSG00000259075 (POC1B-GALNT4)
POC1B-GALNT4 readthrough 		ENST00000547474 (POC1B-GALNT4-002) 89521934-89526262 protein_coding
ENST00000548729 (POC1B-GALNT4-001) 89519408-89526198 protein_coding
ENSG00000270344 (RP11-734K2.4)
 ENST00000605233 (RP11-734K2.4-001) 89525654-89548005 antisense
CIL_0002EZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000019952-ENSMUSG00000019952 CGP 10090 10:99107036-99198074
GeneTranscriptPositionBiotype
ENSMUSG00000019952 (Poc1b)
POC1 centriolar protein homolog B (Chlamydomonas) 		ENSMUST00000020113 (Poc1b-001) 99107036-99197988 protein_coding
ENSMUST00000159043 (Poc1b-004) 99129487-99192789 nonsense_mediated_decay
ENSMUST00000159228 (Poc1b-002) 99107082-99197052 protein_coding
ENSMUST00000159990 (Poc1b-003) 99107103-99198074 protein_coding
ENSMUST00000162704 (Poc1b-005) 99171284-99197028 processed_transcript
ENSMUST00000162847 (Poc1b-006) 99192892-99196850 processed_transcript
ENSMUSG00000055108 (Phxr2)
per-hexamer repeat gene 2 		ENSMUST00000060761 (Phxr2-001) 99125167-99126325 protein_coding
ENSMUSG00000089994 (Gm16239)
predicted gene 16239 		ENSMUST00000160182 (Gm16239-001) 99179184-99184610 antisense
ENSMUSG00000090035 (Galnt4)
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 4 		ENSMUST00000161240 (Galnt4-001) 99108159-99113247 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002EZ_0001ENSG00000139323ENST00000313546ENST00000393179ENST00000539190ENST00000546740ENST00000546830ENST00000547274ENST00000547496ENST00000548715ENST00000549035ENST00000549304ENST00000549504ENST00000549591ENST00000551819ENST00000552563ENSG00000226982ENST00000533085ENSG00000257594ENST00000529983ENSG00000259075ENST00000547474ENST00000548729ENSG00000270344ENST00000605233CIL_0002EZ_0002ENSMUSG00000019952ENSMUST00000020113ENSMUST00000159043ENSMUST00000159228ENSMUST00000159990ENSMUST00000162704ENSMUST00000162847ENSMUSG00000055108ENSMUST00000060761ENSMUSG00000089994ENSMUST00000160182ENSMUSG00000090035ENSMUST00000161240
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002EZ_0001ENSG00000139323ENST00000313546ENST00000393179ENST00000546740ENST00000547496ENST00000549035ENST00000549304ENST00000549591ENST00000551819ENSG00000226982ENST00000533085ENSG00000257594ENST00000529983ENSG00000259075ENST00000547474ENST00000548729ENSG00000270344ENST00000605233CIL_0002EZ_0002ENSMUSG00000019952ENSMUST00000020113ENSMUST00000159043ENSMUST00000159228ENSMUST00000159990ENSMUST00000162704ENSMUSG00000055108ENSMUST00000060761ENSMUSG00000089994ENSMUST00000160182ENSMUSG00000090035ENSMUST00000161240
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000139323 ENST00000313546 1.285±0.00 N/A 0.815±0.00 2.048±1.15 2.368±1.03 2.243±0.16 0.942±0.50 N/A N/A 2.937±0.00 N/A 3.877±2.61 1.142±0.18 2.683±0.61
ENST00000393179 1.097±0.00 2.385±0.00 N/A 1.585±0.79 N/A N/A 0.545±0.00 2.880±0.00 1.010±0.00 1.922±0.00 0.299±0.00 2.010±0.00 1.001±0.08 1.341±0.00
ENST00000539190 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546740 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.955±0.00 3.947±0.00 7.388±0.00
ENST00000546830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547274 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547496 N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.370±0.00 N/A N/A N/A N/A
ENST00000548715 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549035 N/A N/A N/A N/A N/A N/A N/A 1.253±0.00 N/A N/A 0.878±0.00 N/A N/A 9.026±0.00
ENST00000549304 N/A N/A N/A 3.434±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549504 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549591 N/A 0.590±0.00 N/A N/A N/A N/A 0.178±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000551819 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.066±0.00 N/A N/A N/A
ENST00000552563 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000226982 ENST00000533085 N/A 0.008±0.00 N/A 0.031±0.02 0.021±0.01 0.158±0.00 N/A 0.057±0.00 0.032±0.00 0.024±0.00 N/A 0.043±0.03 N/A 0.005±0.00
ENSG00000257594 ENST00000529983 0.967±0.00 1.209±0.00 1.877±0.00 0.984±0.46 5.050±3.59 3.296±2.32 0.536±0.02 1.877±0.00 1.752±0.85 0.991±0.35 N/A 4.573±2.95 0.947±0.16 0.746±0.00
ENSG00000259075 ENST00000547474 N/A N/A 1.268±0.00 0.833±0.00 8.524±0.00 4.764±0.00 N/A 1.016±0.00 N/A N/A N/A N/A N/A N/A
ENST00000548729 N/A N/A N/A N/A N/A N/A 0.265±0.00 0.788±0.09 N/A 1.766±0.00 0.161±0.00 2.936±0.00 0.545±0.19 N/A
ENSG00000270344 ENST00000605233 N/A 0.431±0.00 0.659±0.00 0.183±0.02 0.264±0.11 0.135±0.00 0.136±0.07 0.198±0.00 0.233±0.21 0.536±0.38 0.107±0.06 0.320±0.25 0.073±0.03 0.481±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000019952 ENSMUST00000020113 0.677±0.29 N/A 2.832±0.39 2.902±1.99 1.633±1.01 2.143±0.52 1.026±0.37 1.349±0.49 2.212±1.42 1.531±0.81 0.340±0.16 2.237±0.78 1.826±0.55 9.052±4.21
ENSMUST00000159043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.507±1.05 8.152±0.00
ENSMUST00000159228 N/A 0.902±0.14 N/A N/A N/A N/A N/A 0.666±0.00 0.457±0.00 N/A 0.242±0.04 1.186±0.00 0.857±0.36 12.909±5.46
ENSMUST00000159990 1.699±0.07 2.580±0.58 2.871±0.93 4.290±0.23 1.859±0.46 3.015±1.50 0.850±0.05 1.212±0.53 1.239±0.32 1.588±0.50 0.695±0.16 1.803±0.78 0.825±0.28 10.018±0.48
ENSMUST00000162704 N/A N/A N/A 4.182±2.70 N/A N/A N/A N/A 4.756±0.73 N/A N/A 4.019±0.08 1.194±0.00 N/A
ENSMUST00000162847 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000055108 ENSMUST00000060761 N/A N/A 0.015±0.01 0.051±0.02 0.083±0.02 0.140±0.02 N/A 0.101±0.00 0.013±0.01 0.120±0.02 N/A 0.278±0.00 0.019±0.00 0.107±0.00
ENSMUSG00000089994 ENSMUST00000160182 0.024±0.02 0.029±0.00 0.074±0.04 0.030±0.00 0.042±0.00 0.053±0.01 N/A 0.016±0.01 0.025±0.02 0.025±0.01 0.025±0.00 0.063±0.02 0.027±0.02 0.017±0.00
ENSMUSG00000090035 ENSMUST00000161240 2.079±0.85 0.841±0.32 2.916±0.54 0.389±0.13 1.142±0.39 15.304±0.42 0.463±0.09 1.136±0.12 0.869±0.15 3.490±0.13 0.506±0.08 1.290±0.60 1.027±0.26 0.368±0.15

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