C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000213_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000070914-ENSDARG00000021110 CGP 7955 25:18813588-18922771
GeneTranscriptPositionBiotype
ENSDARG00000021110 (poc1b)
POC1 centriolar protein homolog B (Chlamydomonas) 		ENSDART00000004771 (poc1b-001) 18854268-18922771 protein_coding
ENSDARG00000070914 (dusp6)
dual specificity phosphatase 6 		ENSDART00000104496 (dusp6-001) 18813588-18817793 protein_coding
ENSDART00000133820 (dusp6-002) 18814536-18815447 processed_transcript
CIL_000213_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000139318-ENSG00000139323 CGP 9606 12:89347232-89526024
GeneTranscriptPositionBiotype
ENSG00000139318 (DUSP6)
dual specificity phosphatase 6 		ENST00000279488 (DUSP6-001) 89347232-89353271 protein_coding
ENST00000308385 (DUSP6-002) 89348369-89352405 protein_coding
ENST00000547140 (DUSP6-004) 89349482-89351582 processed_transcript
ENST00000547291 (DUSP6-005) 89349072-89351171 protein_coding
ENST00000548755 (DUSP6-003) 89351689-89352497 protein_coding
ENSG00000139323 (POC1B)
POC1 centriolar protein B 		ENST00000313546 (POC1B-001) 89419718-89526024 protein_coding
ENST00000393179 (POC1B-007) 89419718-89525615 protein_coding
ENST00000539190 (POC1B-006) 89460710-89525993 retained_intron
ENST00000546740 (POC1B-016) 89420787-89461842 processed_transcript
ENST00000546830 (POC1B-009) 89492075-89526000 nonsense_mediated_decay
ENST00000547274 (POC1B-010) 89485269-89526020 nonsense_mediated_decay
ENST00000547496 (POC1B-002) 89421154-89526000 nonsense_mediated_decay
ENST00000548715 (POC1B-011) 89425167-89525997 nonsense_mediated_decay
ENST00000549035 (POC1B-005) 89420896-89525563 protein_coding
ENST00000549304 (POC1B-014) 89459671-89472695 processed_transcript
ENST00000549504 (POC1B-013) 89425287-89525205 protein_coding
ENST00000549591 (POC1B-008) 89419718-89429460 retained_intron
ENST00000551819 (POC1B-015) 89466673-89470405 retained_intron
ENST00000552563 (POC1B-012) 89466768-89525415 retained_intron
ENSG00000226982 (CENPCP1)
centromere protein C pseudogene 1 		ENST00000533085 (CENPCP1-001) 89500093-89502670 processed_pseudogene
ENSG00000257594 (GALNT4)
polypeptide N-acetylgalactosaminyltransferase 4 		ENST00000529983 (GALNT4-001) 89519408-89524806 protein_coding
ENSG00000259075 (POC1B-GALNT4)
POC1B-GALNT4 readthrough 		ENST00000547474 (POC1B-GALNT4-002) 89521934-89526262 protein_coding
ENST00000548729 (POC1B-GALNT4-001) 89519408-89526198 protein_coding
ENSG00000270344 (RP11-734K2.4)
 ENST00000605233 (RP11-734K2.4-001) 89525654-89548005 antisense
ENSG00000271259 (RP11-1109F11.5)
 ENST00000605051 (RP11-1109F11.5-001) 89371820-89372359 lincRNA
ENSG00000271327 (RP11-1109F11.3)
 ENST00000605595 (RP11-1109F11.3-001) 89367807-89369301 lincRNA
ENSG00000274021 (RP11-823E8.3)
 ENST00000611513 (RP11-823E8.3-001) 89351015-89353271 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000213_0001ENSDARG00000021110ENSDART00000004771ENSDARG00000070914ENSDART00000104496ENSDART00000133820CIL_000213_0002ENSG00000139318ENST00000279488ENST00000308385ENST00000547140ENST00000547291ENST00000548755ENSG00000139323ENST00000313546ENST00000393179ENST00000539190ENST00000546740ENST00000546830ENST00000547274ENST00000547496ENST00000548715ENST00000549035ENST00000549304ENST00000549504ENST00000549591ENST00000551819ENST00000552563ENSG00000226982ENST00000533085ENSG00000257594ENST00000529983ENSG00000259075ENST00000547474ENST00000548729ENSG00000270344ENST00000605233ENSG00000271259ENST00000605051ENSG00000271327ENST00000605595ENSG00000274021ENST00000611513
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000213_0001ENSDARG00000021110ENSDART00000004771ENSDARG00000070914ENSDART00000104496CIL_000213_0002ENSG00000139318ENST00000279488ENST00000308385ENST00000547291ENSG00000139323ENST00000313546ENST00000393179ENST00000546740ENST00000547496ENST00000549035ENST00000549304ENST00000549591ENST00000551819ENSG00000226982ENST00000533085ENSG00000257594ENST00000529983ENSG00000259075ENST00000547474ENST00000548729ENSG00000270344ENST00000605233ENSG00000271259ENST00000605051ENSG00000271327ENST00000605595ENSG00000274021ENST00000611513
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000021110 ENSDART00000004771 N/A N/A N/A 0.478±0.22 N/A N/A 1.033±0.07 1.957±1.23 0.127±0.00 N/A 0.794±0.00 N/A N/A N/A
ENSDARG00000070914 ENSDART00000104496 N/A N/A N/A 36.476±8.04 N/A N/A 64.524±39.56 21.378±0.00 2.133±0.00 N/A 61.949±0.00 N/A N/A N/A
ENSDART00000133820 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000139318 ENST00000279488 N/A N/A N/A 0.780±0.00 N/A N/A N/A N/A N/A 1.593±0.00 N/A 1.191±0.00 N/A N/A
ENST00000308385 N/A 6.699±0.00 1.446±0.00 1.507±0.00 N/A 2.005±0.00 2.306±0.00 N/A N/A N/A N/A 2.577±0.00 N/A 2.236±0.00
ENST00000547140 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547291 N/A N/A 3.854±0.00 N/A N/A 2.682±0.00 2.643±0.00 N/A N/A N/A 1.256±0.00 2.443±0.20 N/A 1.672±0.00
ENST00000548755 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000139323 ENST00000313546 1.285±0.00 N/A 0.815±0.00 2.048±1.15 2.368±1.03 2.243±0.16 0.942±0.50 N/A N/A 2.937±0.00 N/A 3.877±2.61 1.142±0.18 2.683±0.61
ENST00000393179 1.097±0.00 2.385±0.00 N/A 1.585±0.79 N/A N/A 0.545±0.00 2.880±0.00 1.010±0.00 1.922±0.00 0.299±0.00 2.010±0.00 1.001±0.08 1.341±0.00
ENST00000539190 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546740 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.955±0.00 3.947±0.00 7.388±0.00
ENST00000546830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547274 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547496 N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.370±0.00 N/A N/A N/A N/A
ENST00000548715 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549035 N/A N/A N/A N/A N/A N/A N/A 1.253±0.00 N/A N/A 0.878±0.00 N/A N/A 9.026±0.00
ENST00000549304 N/A N/A N/A 3.434±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549504 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549591 N/A 0.590±0.00 N/A N/A N/A N/A 0.178±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000551819 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.066±0.00 N/A N/A N/A
ENST00000552563 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000226982 ENST00000533085 N/A 0.008±0.00 N/A 0.031±0.02 0.021±0.01 0.158±0.00 N/A 0.057±0.00 0.032±0.00 0.024±0.00 N/A 0.043±0.03 N/A 0.005±0.00
ENSG00000257594 ENST00000529983 0.967±0.00 1.209±0.00 1.877±0.00 0.984±0.46 5.050±3.59 3.296±2.32 0.536±0.02 1.877±0.00 1.752±0.85 0.991±0.35 N/A 4.573±2.95 0.947±0.16 0.746±0.00
ENSG00000259075 ENST00000547474 N/A N/A 1.268±0.00 0.833±0.00 8.524±0.00 4.764±0.00 N/A 1.016±0.00 N/A N/A N/A N/A N/A N/A
ENST00000548729 N/A N/A N/A N/A N/A N/A 0.265±0.00 0.788±0.09 N/A 1.766±0.00 0.161±0.00 2.936±0.00 0.545±0.19 N/A
ENSG00000270344 ENST00000605233 N/A 0.431±0.00 0.659±0.00 0.183±0.02 0.264±0.11 0.135±0.00 0.136±0.07 0.198±0.00 0.233±0.21 0.536±0.38 0.107±0.06 0.320±0.25 0.073±0.03 0.481±0.03
ENSG00000271259 ENST00000605051 N/A 0.189±0.00 0.371±0.00 0.171±0.00 0.340±0.00 0.056±0.00 N/A 0.245±0.00 0.925±0.00 0.070±0.00 N/A 0.245±0.12 N/A 0.178±0.02
ENSG00000271327 ENST00000605595 0.316±0.00 0.158±0.00 0.735±0.00 0.238±0.11 0.484±0.25 0.121±0.03 0.228±0.12 0.618±0.16 0.328±0.31 0.576±0.00 N/A 0.300±0.12 0.037±0.01 0.433±0.17
ENSG00000274021 ENST00000611513 N/A 5.672±0.00 N/A 3.529±1.33 4.733±0.00 N/A N/A 6.197±0.00 2.865±0.00 5.378±0.00 0.616±0.10 3.812±1.10 10.038±1.05 1.889±0.00

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