C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: BCL2L2-PABPN1 readthrough
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000258643 BCL2L2-PABPN1 9606 + 14:23306835-23325369 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000553781 BCL2L2-PABPN1-001 23306835-23325369 protein_coding
  ENST00000556100 BCL2L2-PABPN1-003 23306850-23319816 processed_transcript
  ENST00000557008 BCL2L2-PABPN1-002 23306967-23325329 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090C CIL_00090C_0001 VISTA 14:23078458-23681621
CIL_0009BW CIL_0009BW_0001 VISTA 14:23137378-23739005
CIL_0008Q4 CIL_0008Q4_0001 VISTA 14:23138150-23738498
CIL_0008QH CIL_0008QH_0001 VISTA 14:23142404-23743714
CIL_0003LS CIL_0003LS_0001 CGP 14:23295643-23311759
CIL_00051H CIL_00051H_0001 CGP 14:23298790-23325369
CIL_00051J CIL_00051J_0001 CGP 14:23306835-23326185

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0005515 IPI protein binding
GO:0005741 IBA mitochondrial outer membrane
GO:0007283 TAS spermatogenesis
GO:0008630 IBA intrinsic apoptotic signaling pathway in response to DNA damage
GO:0042803 IBA protein homodimerization activity
GO:0042981 IEA regulation of apoptotic process
GO:0043066 IMP negative regulation of apoptotic process
GO:0046982 IBA protein heterodimerization activity
GO:0070062 IDA extracellular vesicular exosome
GO:0097192 IBA extrinsic apoptotic signaling pathway in absence of ligand
GO:2001243 IBA negative regulation of intrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045373 pabpn1 poly(A) binding protein, nuclear 1 protein_coding Danio_rerio
ENSMUSG00000092232 Gm20521 predicted gene 20521 protein_coding Mus_musculus

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