C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | BCL2L2-PABPN1 readthrough | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000553781  |
BCL2L2-PABPN1-001 |
ENSG00000258643 |
9606 | + |
14:23306835-23325369  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00090C | CIL_00090C_0001 | VISTA | 14:23078458-23681621 |
| CIL_0009BW | CIL_0009BW_0001 | VISTA | 14:23137378-23739005 |
| CIL_0008Q4 | CIL_0008Q4_0001 | VISTA | 14:23138150-23738498 |
| CIL_0008QH | CIL_0008QH_0001 | VISTA | 14:23142404-23743714 |
| CIL_0003LS | CIL_0003LS_0001 | CGP | 14:23295643-23311759 |
| CIL_00051H | CIL_00051H_0001 | CGP | 14:23298790-23325369 |
| CIL_00051J | CIL_00051J_0001 | CGP | 14:23306835-23326185 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000166 | IEA | nucleotide binding |
| GO:0003676 | IEA | nucleic acid binding |
| GO:0005515 | IPI | protein binding |
| GO:0005741 | IBA | mitochondrial outer membrane |
| GO:0007283 | TAS | spermatogenesis |
| GO:0008630 | IBA | intrinsic apoptotic signaling pathway in response to DNA damage |
| GO:0042803 | IBA | protein homodimerization activity |
| GO:0042981 | IEA | regulation of apoptotic process |
| GO:0043066 | IMP | negative regulation of apoptotic process |
| GO:0046982 | IBA | protein heterodimerization activity |
| GO:0070062 | IDA | extracellular vesicular exosome |
| GO:0097192 | IBA | extrinsic apoptotic signaling pathway in absence of ligand |
| GO:2001243 | IBA | negative regulation of intrinsic apoptotic signaling pathway |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000134077
|
Gm20521-001 | protein_coding | Mus_musculus | 0 | 1792 |
|
ENSMUST00000022808
|
Pabpn1-001 | protein_coding | Mus_musculus | 0 | 1007 |
|
ENSMUST00000172557
|
Pabpn1-009 | protein_coding | Mus_musculus | 0 | 1005 |
|
ENSMUST00000172695
|
Pabpn1-008 | nonsense_mediated_decay | Mus_musculus | 0 | 867 |
|
ENSMUST00000139985
|
Pabpn1-006 | protein_coding | Mus_musculus | 0 | 795 |
|
ENSMUST00000141446
|
Pabpn1-005 | protein_coding | Mus_musculus | 0 | 795 |
|
ENSMUST00000116476
|
Pabpn1-003 | protein_coding | Mus_musculus | 0 | 795 |
|
ENSMUST00000022806
|
Bcl2l2-001 | protein_coding | Mus_musculus | 0 | 789 |
|
ENSMUST00000133397
|
Bcl2l2-002 | protein_coding | Mus_musculus | 0 | 723 |
|
ENSMUST00000140691
|
Pabpn1-004 | protein_coding | Mus_musculus | 0 | 665 |
|
ENSMUST00000150975
|
Pabpn1-002 | protein_coding | Mus_musculus | 0 | 582 |
|
ENSMUST00000172844
|
Bcl2l2-004 | protein_coding | Mus_musculus | 0 | 259 |
|
ENSMUST00000146271
|
Pabpn1-007 | protein_coding | Mus_musculus | 0 | 215 |
