C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: poly(A) binding protein, nuclear 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000045373 pabpn1 7955 - 24:14463461-14481677 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000066722 pabpn1-001 14463461-14481677 protein_coding
  ENSDART00000109088 pabpn1-201 14465003-14481451 protein_coding
  ENSDART00000125153 pabpn1-202 14463981-14481315 protein_coding
  ENSDART00000135426 pabpn1-003 14470742-14481358 protein_coding
  ENSDART00000140624 pabpn1-002 14464015-14480945 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000066722ENSDART00000109088ENSDART00000125153ENSDART00000135426
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000066722 84.074±18.05 67.920±2.38 30.640±0.00 7.597±0.00 29.558±0.00
ENSDART00000109088 N/A N/A N/A 4.526±0.00 N/A
ENSDART00000125153 N/A 73.244±0.00 46.612±0.00 N/A N/A
ENSDART00000135426 N/A 3.128±0.00 N/A 3.544±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000100836 PABPN1 poly(A) binding protein, nuclear 1 protein_coding Homo_sapiens
ENSG00000258643 BCL2L2-PABPN1 BCL2L2-PABPN1 readthrough protein_coding Homo_sapiens
ENSMUSG00000022194 Pabpn1 poly(A) binding protein, nuclear 1 protein_coding Mus_musculus
ENSMUSG00000092232 Gm20521 predicted gene 20521 protein_coding Mus_musculus

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