C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: predicted gene 20521
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000092232 Gm20521 10090 + 14:54883441-54898137 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000134077 Gm20521-001 54883441-54898137 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonENSMUST00000134077
Transcript ID Colon
ENSMUST00000134077 22.801±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090C CIL_00090C_0002 VISTA 14:54638004-55241428
CIL_0009BW CIL_0009BW_0002 VISTA 14:54696106-55297707
CIL_0008Q4 CIL_0008Q4_0002 VISTA 14:54696894-55297224
CIL_0008QH CIL_0008QH_0002 VISTA 14:54703667-55304830
CIL_0003LS CIL_0003LS_0002 CGP 14:54872669-54888234
CIL_00051H CIL_00051H_0002 CGP 14:54883377-54898137
CIL_00051J CIL_00051J_0002 CGP 14:54883441-54898169

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0005515 IEA protein binding
GO:0005741 IBA mitochondrial outer membrane
GO:0006378 TAS mRNA polyadenylation
GO:0008143 TAS poly(A) binding
GO:0008630 IBA intrinsic apoptotic signaling pathway in response to DNA damage
GO:0042803 IBA protein homodimerization activity
GO:0043066 IBA negative regulation of apoptotic process
GO:0046982 IBA protein heterodimerization activity
GO:0070062 IEA extracellular vesicular exosome
GO:0097192 IBA extrinsic apoptotic signaling pathway in absence of ligand
GO:2001243 IBA negative regulation of intrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045373 pabpn1 poly(A) binding protein, nuclear 1 protein_coding Danio_rerio
ENSG00000258643 BCL2L2-PABPN1 BCL2L2-PABPN1 readthrough protein_coding Homo_sapiens

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