C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: BLOC1S5-TXNDC5 readthrough (NMD candidate)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000259040 BLOC1S5-TXNDC5 9606 - 6:7881250-8064364 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000439343 BLOC1S5-TXNDC5-001 7881522-8064364 nonsense_mediated_decay
  ENST00000539054 BLOC1S5-TXNDC5-201 7881250-8026413 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastKidneyLiverLungMuscleOvaryENST00000439343ENST00000539054
Transcript ID Adipose Bladder Brain Breast Kidney Liver Lung Muscle Ovary
ENST00000439343 N/A N/A N/A N/A N/A N/A N/A 2.734±0.00 N/A
ENST00000539054 16.834±0.00 3.465±0.00 5.057±0.00 9.499±0.00 4.511±0.00 3.238±0.00 8.078±0.00 0.835±0.00 14.697±3.82

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000380 CIL_000380_0001 CGP 6:7590199-7881422
CIL_000161 CIL_000161_0002 CGP 6:7726797-8064364

Gene Ontology
GO IDEvidence TypeGO Description
GO:0008152 IEA metabolic process
GO:0016853 IEA isomerase activity
GO:0030133 IEA transport vesicle
GO:0031083 IEA BLOC-1 complex
GO:0045454 IEA cell redox homeostasis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000009342 txndc5 thioredoxin domain containing 5 protein_coding Danio_rerio

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