C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_000380_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000168566-ENSG00000153162 CGP 9606 6:7590199-7881422
GeneTranscriptPositionBiotype
ENSG00000153162 (BMP6)
bone morphogenetic protein 6
ENST00000283147 (BMP6-001) 7726797-7881422 protein_coding
ENSG00000168566 (SNRNP48)
small nuclear ribonucleoprotein 48kDa (U11/U12)
ENST00000342415 (SNRNP48-001) 7590199-7611967 protein_coding
ENST00000496946 (SNRNP48-002) 7599673-7609206 retained_intron
ENSG00000236512 (RP3-336K20__B.2)
ENST00000456647 (RP3-336K20__B.2-001) 7620422-7620878 processed_pseudogene
ENSG00000259040 (BLOC1S5-TXNDC5)
BLOC1S5-TXNDC5 readthrough (NMD candidate)
ENST00000439343 (BLOC1S5-TXNDC5-001) 7881522-8064364 nonsense_mediated_decay
ENST00000539054 (BLOC1S5-TXNDC5-201) 7881250-8026413 protein_coding
CIL_000380_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021431-ENSMUSG00000039004 CGP 10090 13:38204939-38499728
GeneTranscriptPositionBiotype
ENSMUSG00000021431 (Snrnp48)
small nuclear ribonucleoprotein 48 (U11/U12)
ENSMUST00000091641 (Snrnp48-201) 38204939-38227663 protein_coding
ENSMUST00000178564 (Snrnp48-202) 38204951-38226922 protein_coding
ENSMUSG00000039004 (Bmp6)
bone morphogenetic protein 6
ENSMUST00000171970 (Bmp6-201) 38345716-38499728 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000380_0001ENSG00000153162ENST00000283147ENSG00000168566ENST00000342415ENST00000496946ENSG00000236512ENST00000456647ENSG00000259040ENST00000439343ENST00000539054CIL_000380_0002ENSMUSG00000021431ENSMUST00000091641ENSMUST00000178564ENSMUSG00000039004ENSMUST00000171970
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000380_0001ENSG00000153162ENST00000283147ENSG00000168566ENST00000342415ENST00000496946ENSG00000236512ENST00000456647ENSG00000259040ENST00000439343ENST00000539054CIL_000380_0002ENSMUSG00000021431ENSMUST00000091641ENSMUST00000178564ENSMUSG00000039004ENSMUST00000171970
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000153162 ENST00000283147 29.873±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 17.103±0.00 N/A N/A 27.749±3.40 N/A
ENSG00000168566 ENST00000342415 2.172±0.00 1.825±0.00 0.351±0.00 0.800±0.36 1.881±0.22 2.165±0.90 1.842±0.03 2.002±1.02 1.342±0.12 1.023±0.56 4.058±0.00 2.959±1.85 1.798±1.27 2.301±0.57
ENST00000496946 N/A N/A 1.472±0.00 0.240±0.00 1.676±0.00 0.983±0.00 0.442±0.00 0.464±0.00 1.237±0.00 N/A N/A 1.186±0.00 N/A 0.669±0.00
ENSG00000236512 ENST00000456647 0.085±0.00 0.507±0.00 N/A N/A 0.048±0.00 N/A N/A N/A 0.316±0.00 0.089±0.00 N/A 0.108±0.00 N/A N/A
ENSG00000259040 ENST00000439343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.734±0.00 N/A N/A N/A
ENST00000539054 16.834±0.00 N/A 3.465±0.00 5.057±0.00 9.499±0.00 N/A N/A 4.511±0.00 3.238±0.00 8.078±0.00 0.835±0.00 14.697±3.82 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021431 ENSMUST00000091641 1.976±0.00 13.025±1.28 3.626±0.00 3.373±0.00 N/A 3.540±0.39 1.608±0.00 2.385±0.70 3.612±1.46 N/A 2.318±0.55 4.712±1.66 4.124±1.62 2.173±0.61
ENSMUST00000178564 10.275±2.43 15.821±5.44 7.503±0.00 N/A 26.825±8.61 24.463±5.65 6.588±1.38 11.301±1.80 9.722±3.61 24.940±0.00 1.523±0.19 37.033±8.89 19.833±16.55 14.455±10.25
ENSMUSG00000039004 ENSMUST00000171970 10.124±3.17 5.599±0.65 11.074±0.32 5.375±0.00 6.722±0.42 8.897±0.42 10.742±3.18 27.272±8.91 0.812±0.42 76.053±18.27 3.522±0.14 10.982±3.54 2.037±1.63 1.106±0.54

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