C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BLOC1S5-TXNDC5 readthrough (NMD candidate)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000539054 BLOC1S5-TXNDC5-201 ENSG00000259040 9606 - 6:7881250-8026413 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastKidneyLiverLungMuscleOvaryENST00000539054
Transcript ID Adipose Bladder Brain Breast Kidney Liver Lung Muscle Ovary
ENST00000539054 16.834±0.00 3.465±0.00 5.057±0.00 9.499±0.00 4.511±0.00 3.238±0.00 8.078±0.00 0.835±0.00 14.697±3.82

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000380 CIL_000380_0001 CGP 6:7590199-7881422
CIL_000161 CIL_000161_0002 CGP 6:7726797-8064364

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008152 IEA metabolic process
GO:0016853 IEA isomerase activity
GO:0045454 IEA cell redox homeostasis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000162075 Txndc5-002 protein_coding Mus_musculus 0 1103
ENSMUST00000035988 Txndc5-001 protein_coding Mus_musculus 0 1101
ENSMUST00000160653 Txndc5-003 protein_coding Mus_musculus 0 1099

Loading