C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coronin 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000251166 CORO7-001 ENSG00000262246 9606 - 16:4354542-4416664 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000251166
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000251166 4.737±0.00 20.159±0.00 11.555±0.00 2.375±1.77 2.431±0.00 4.520±0.00 1.137±0.98 21.986±0.00 2.716±0.00 9.647±0.58 13.677±3.99 13.067±1.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00009U CIL_00009U_0001 CGP 16:4314761-4355607
CIL_00009Y CIL_00009Y_0001 CGP 16:4331549-4420494
CIL_00009L CIL_00009L_0001 CGP 16:4354542-4425705

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IDA actin binding
GO:0005515 IPI:IEA protein binding
GO:0005794 ISS Golgi apparatus
GO:0005802 IDA trans-Golgi network
GO:0006895 IMP Golgi to endosome transport
GO:0015031 IEA protein transport
GO:0016020 IDA membrane
GO:0016021 ISS integral component of membrane
GO:0030041 IMP actin filament polymerization
GO:0031410 IEA cytoplasmic vesicle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038552 Coro7-001 protein_coding Mus_musculus 0 2444
ENSMUST00000135823 Coro7-002 nonsense_mediated_decay Mus_musculus 0 1415
ENSMUST00000090480 Coro7-003 protein_coding Mus_musculus 0 721
ENSMUST00000123031 Coro7-004 retained_intron Mus_musculus 0 549
ENSMUST00000127850 Coro7-012 retained_intron Mus_musculus 0 191

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