C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000265808 SEC22B 9606 - 1:120150898-120176515 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000578049 SEC22B-001 120150898-120176515 protein_coding
  ENST00000618538 SEC22B-002 120157291-120160501 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000578049
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000578049 7.781±0.00 6.049±0.00 4.032±0.00 6.343±0.24 8.023±2.92 5.707±0.29 2.709±0.67 8.069±1.24 6.829±0.81 7.248±0.28 3.410±2.65 5.486±2.22 7.154±3.71 5.874±0.77

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 IEA Golgi membrane
GO:0005515 IPI protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0005789 IEA endoplasmic reticulum membrane
GO:0005793 IDA endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 IEA Golgi apparatus
GO:0006810 IEA transport
GO:0006888 TAS ER to Golgi vesicle-mediated transport
GO:0015031 IEA protein transport
GO:0016021 IEA integral component of membrane
GO:0016192 IEA vesicle-mediated transport
GO:0019905 IEA syntaxin binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000030108 sec22ba SEC22 vesicle trafficking protein homolog B (S. cerevisiae), a protein_coding Danio_rerio
ENSDARG00000093866 sec22bb SEC22 vesicle trafficking protein homolog B (S. cerevisiae), b protein_coding Danio_rerio
ENSMUSG00000027879 Sec22b SEC22 vesicle trafficking protein homolog B (S. cerevisiae) protein_coding Mus_musculus

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