C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SLIT-ROBO Rho GTPase activating protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000266028 SRGAP2 9606 + 1:206203345-206464443 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000419187 SRGAP2-201 206205626-206406709 protein_coding
  ENST00000572793 SRGAP2-011 206214723-206392757 protein_coding
  ENST00000573034 SRGAP2-001 206205909-206464443 protein_coding
  ENST00000579225 SRGAP2-007 206203345-206303473 protein_coding
  ENST00000603575 SRGAP2-009 206203908-206205819 processed_transcript
  ENST00000603708 SRGAP2-008 206203346-206205829 processed_transcript
  ENST00000604010 SRGAP2-015 206453199-206461227 protein_coding
  ENST00000604133 SRGAP2-012 206312148-206392904 processed_transcript
  ENST00000604247 SRGAP2-005 206453661-206456159 retained_intron
  ENST00000604419 SRGAP2-013 206437619-206446204 retained_intron
  ENST00000604423 SRGAP2-006 206404963-206408031 retained_intron
  ENST00000604925 SRGAP2-014 206440061-206456131 protein_coding
  ENST00000605242 SRGAP2-010 206214505-206384066 processed_transcript
  ENST00000605476 SRGAP2-004 206406377-206456159 protein_coding
  ENST00000605610 SRGAP2-002 206205673-206454700 protein_coding
  ENST00000624686 SRGAP2-003 206203888-206208229 TEC
  ENST00000624873 SRGAP2-016 206205909-206462850 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000573034ENST00000604010ENST00000604247ENST00000604423ENST00000605476ENST00000624686ENST00000624873
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000573034 1.257±0.00 1.501±0.00 0.622±0.00 2.807±0.00 1.129±0.17 0.890±0.50 0.754±0.59 4.440±0.00 0.939±0.05 1.632±0.52 0.184±0.12 1.797±1.68 3.599±1.10 2.001±0.11
ENST00000604010 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.684±0.00
ENST00000604247 6.247±0.00 3.540±0.00 N/A 4.611±0.00 2.454±0.00 2.484±0.00 0.975±0.00 N/A 0.443±0.00 10.109±0.00 0.582±0.36 2.669±1.18 2.971±0.00 2.407±0.00
ENST00000604423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.536±0.00 N/A N/A N/A
ENST00000605476 7.628±0.00 2.870±0.00 N/A 3.418±1.45 2.200±0.00 3.653±0.00 1.441±0.00 1.469±1.04 0.956±0.00 11.125±0.00 2.289±0.00 2.723±1.82 3.414±0.05 2.886±0.51
ENST00000624686 N/A N/A 1.072±0.00 1.389±0.00 N/A N/A 0.785±0.00 N/A 1.699±0.00 N/A 0.131±0.00 1.767±0.00 N/A N/A
ENST00000624873 N/A N/A N/A N/A N/A N/A N/A 0.102±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0007165 IEA signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000032161 srgap2a SLIT-ROBO Rho GTPase activating protein 2a protein_coding Danio_rerio

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