C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SLIT-ROBO Rho GTPase activating protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000605476 SRGAP2-004 ENSG00000266028 9606 + 1:206406377-206456159 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000605476
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000605476 7.628±0.00 2.870±0.00 3.418±1.45 2.200±0.00 3.653±0.00 1.441±0.00 1.469±1.04 0.956±0.00 11.125±0.00 2.289±0.00 2.723±1.82 3.414±0.05 2.886±0.51

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0007165 IEA signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000188770 Srgap2-006 protein_coding Mus_musculus 0 2377
ENSMUST00000097588 Srgap2-001 protein_coding Mus_musculus 0 1890
ENSMUST00000186543 Srgap2-004 protein_coding Mus_musculus 0 1888
ENSMUST00000185596 Srgap2-005 protein_coding Mus_musculus 0 1633
ENSMUST00000190336 Srgap2-007 processed_transcript Mus_musculus 0 1472
ENSMUST00000189892 Srgap2-008 processed_transcript Mus_musculus 0 941
ENSMUST00000187042 Srgap2-012 protein_coding Mus_musculus 0 560
ENSMUST00000188604 Srgap2-013 processed_transcript Mus_musculus 3e-21 108

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