C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SLIT-ROBO Rho GTPase activating protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000573034 SRGAP2-001 ENSG00000266028 9606 + 1:206205909-206464443 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000573034
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000573034 1.257±0.00 1.501±0.00 0.622±0.00 2.807±0.00 1.129±0.17 0.890±0.50 0.754±0.59 4.440±0.00 0.939±0.05 1.632±0.52 0.184±0.12 1.797±1.68 3.599±1.10 2.001±0.11

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0007165 IEA signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000097588 Srgap2-001 protein_coding Mus_musculus 0 5009
ENSMUST00000186543 Srgap2-004 protein_coding Mus_musculus 0 3615
ENSMUST00000185596 Srgap2-005 protein_coding Mus_musculus 0 2641
ENSMUST00000188770 Srgap2-006 protein_coding Mus_musculus 0 1892
ENSMUST00000190336 Srgap2-007 processed_transcript Mus_musculus 0 1472
ENSDART00000045391 srgap2a-201 protein_coding Danio_rerio 0 1447
ENSDART00000103865 srgap2a-001 protein_coding Danio_rerio 0 1447
ENSMUST00000187042 Srgap2-012 protein_coding Mus_musculus 0 998
ENSMUST00000189892 Srgap2-008 processed_transcript Mus_musculus 0 941
ENSMUST00000189893 Srgap2-002 retained_intron Mus_musculus 0 817
ENSMUST00000113169 Srgap3-004 protein_coding Mus_musculus 0 601
ENSMUST00000185445 Srgap2-009 protein_coding Mus_musculus 0 501
ENSMUST00000060215 Srgap3-003 retained_intron Mus_musculus 0 401
ENSMUST00000088373 Srgap3-001 protein_coding Mus_musculus 0 401
ENSMUST00000187273 Srgap2-010 protein_coding Mus_musculus 0 246
ENSMUST00000188604 Srgap2-013 processed_transcript Mus_musculus 9e-21 108

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