C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: small integral membrane protein 22
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000267795 SMIM22 9606 + 16:4788397-4796491 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000586005 SMIM22-008 4795421-4796281 protein_coding
  ENST00000586440 SMIM22-011 4795713-4796491 protein_coding
  ENST00000588500 SMIM22-005 4795703-4796316 protein_coding
  ENST00000588606 SMIM22-007 4795378-4796281 protein_coding
  ENST00000588894 SMIM22-004 4795703-4796311 retained_intron
  ENST00000589327 SMIM22-002 4788456-4796281 protein_coding
  ENST00000589721 SMIM22-001 4788397-4796281 protein_coding
  ENST00000591004 SMIM22-006 4788413-4795336 retained_intron
  ENST00000591870 SMIM22-010 4795680-4796279 protein_coding
  ENST00000615471 SMIM22-201 4788397-4796231 protein_coding
  ENST00000615889 SMIM22-202 4788397-4796491 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENST00000586005ENST00000586440ENST00000588606ENST00000588894ENST00000591004ENST00000591870
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENST00000586005 N/A N/A 3.410±0.00 15.005±0.00 N/A 3.834±0.00 N/A 7.972±0.00 9.082±4.38 3.492±2.02
ENST00000586440 N/A 0.329±0.00 N/A N/A 0.223±0.14 N/A N/A N/A N/A 0.429±0.00
ENST00000588606 N/A N/A 8.611±4.21 25.999±0.00 N/A 6.930±0.00 3.889±0.00 8.772±6.18 8.854±3.20 8.001±0.00
ENST00000588894 N/A 1.358±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591004 N/A 0.326±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591870 0.215±0.00 N/A 1.717±0.00 15.447±0.00 0.161±0.00 N/A 0.072±0.00 N/A N/A 2.315±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00004Y CIL_00004Y_0001 CGP 16:4777669-4796491
CIL_00004V CIL_00004V_0001 CGP 16:4788397-4802950

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000096427 SMIM22 small integral membrane protein 22 protein_coding Danio_rerio
ENSMUSG00000096215 Smim22 small integral membrane protein 22 protein_coding Mus_musculus

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