C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00004V_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000267795-ENSG00000067836 CGP 9606 16:4788397-4802950
GeneTranscriptPositionBiotype
ENSG00000067836 (ROGDI)
rogdi homolog (Drosophila) 		ENST00000322048 (ROGDI-001) 4796968-4802950 protein_coding
ENST00000585653 (ROGDI-013) 4798504-4802630 retained_intron
ENST00000585871 (ROGDI-007) 4801029-4802880 retained_intron
ENST00000586153 (ROGDI-016) 4797721-4800578 protein_coding
ENST00000586336 (ROGDI-008) 4797742-4802184 processed_transcript
ENST00000586504 (ROGDI-009) 4797403-4801301 protein_coding
ENST00000587377 (ROGDI-003) 4796987-4802615 nonsense_mediated_decay
ENST00000587711 (ROGDI-014) 4797707-4802627 protein_coding
ENST00000587843 (ROGDI-002) 4796969-4802633 nonsense_mediated_decay
ENST00000588201 (ROGDI-005) 4797247-4802673 nonsense_mediated_decay
ENST00000589543 (ROGDI-011) 4797780-4801659 retained_intron
ENST00000590198 (ROGDI-012) 4801333-4802665 retained_intron
ENST00000591292 (ROGDI-006) 4796969-4802162 retained_intron
ENST00000591392 (ROGDI-015) 4797703-4802621 protein_coding
ENST00000592019 (ROGDI-010) 4797309-4800552 protein_coding
ENST00000592112 (ROGDI-004) 4801816-4802856 retained_intron
ENSG00000140623 (SEPT12)
septin 12 		ENST00000268231 (SEPT12-001) 4777669-4788521 protein_coding
ENST00000396693 (SEPT12-003) 4777669-4788346 protein_coding
ENST00000587603 (SEPT12-002) 4777673-4788347 nonsense_mediated_decay
ENST00000588241 (SEPT12-008) 4777669-4785836 nonsense_mediated_decay
ENST00000590303 (SEPT12-006) 4785709-4788348 retained_intron
ENST00000590741 (SEPT12-005) 4783931-4788352 nonsense_mediated_decay
ENST00000591624 (SEPT12-007) 4786078-4788254 protein_coding
ENST00000591861 (SEPT12-004) 4784239-4788398 processed_transcript
ENSG00000267077 (RP11-127I20.5)
 ENST00000592465 (RP11-127I20.5-001) 4795265-4796532 antisense
ENSG00000267795 (SMIM22)
small integral membrane protein 22 		ENST00000586005 (SMIM22-008) 4795421-4796281 protein_coding
ENST00000586440 (SMIM22-011) 4795713-4796491 protein_coding
ENST00000588500 (SMIM22-005) 4795703-4796316 protein_coding
ENST00000588606 (SMIM22-007) 4795378-4796281 protein_coding
ENST00000588894 (SMIM22-004) 4795703-4796311 retained_intron
ENST00000589327 (SMIM22-002) 4788456-4796281 protein_coding
ENST00000589721 (SMIM22-001) 4788397-4796281 protein_coding
ENST00000591004 (SMIM22-006) 4788413-4795336 retained_intron
ENST00000591870 (SMIM22-010) 4795680-4796279 protein_coding
ENST00000615471 (SMIM22-201) 4788397-4796231 protein_coding
ENST00000615889 (SMIM22-202) 4788397-4796491 protein_coding
CIL_00004V_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000096215-ENSMUSG00000022540 CGP 10090 16:5007288-5013517
GeneTranscriptPositionBiotype
ENSMUSG00000022540 (Rogdi)
rogdi homolog (Drosophila) 		ENSMUST00000023191 (Rogdi-201) 5008730-5013517 protein_coding
ENSMUST00000090453 (Rogdi-202) 5008755-5013517 protein_coding
ENSMUSG00000096215 (Smim22)
small integral membrane protein 22 		ENSMUST00000178155 (Smim22-001) 5007337-5008309 protein_coding
ENSMUST00000183381 (Smim22-006) 5007352-5008309 processed_transcript
ENSMUST00000183477 (Smim22-007) 5007359-5008309 processed_transcript
ENSMUST00000183631 (Smim22-008) 5007768-5008309 retained_intron
ENSMUST00000183821 (Smim22-003) 5007316-5008042 retained_intron
ENSMUST00000184256 (Smim22-009) 5007352-5008306 protein_coding
ENSMUST00000184439 (Smim22-002) 5007288-5008306 protein_coding
ENSMUST00000185147 (Smim22-004) 5007352-5008309 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00004V_0001ENSG00000067836ENST00000322048ENST00000586504ENST00000587377ENST00000587843ENST00000589543ENST00000591292ENST00000591392ENST00000592019ENSG00000140623ENST00000268231ENST00000396693ENST00000587603ENST00000590303ENST00000590741ENSG00000267077ENST00000592465ENSG00000267795ENST00000586005ENST00000586440ENST00000588606ENST00000588894ENST00000591004ENST00000591870CIL_00004V_0002ENSMUSG00000022540ENSMUST00000023191ENSMUST00000090453ENSMUSG00000096215ENSMUST00000178155ENSMUST00000183381ENSMUST00000183477ENSMUST00000183821ENSMUST00000184256ENSMUST00000184439ENSMUST00000185147
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000067836 ENST00000322048 N/A N/A N/A N/A 0.992±0.00 0.830±0.00 4.583±0.00 1.084±0.00 N/A 4.786±0.00 1.876±0.00 4.146±0.10 3.710±0.48 1.976±0.00
ENST00000585653 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585871 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586153 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586336 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586504 N/A N/A 0.924±0.00 N/A N/A N/A N/A N/A 1.644±0.00 1.074±0.00 3.151±0.00 N/A N/A N/A
ENST00000587377 N/A N/A 1.186±0.00 17.466±7.31 1.656±0.00 7.813±0.00 5.311±3.16 9.205±0.00 2.074±0.75 1.117±0.00 3.999±2.44 7.143±4.60 7.118±1.43 4.955±0.61
ENST00000587711 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587843 1.929±0.00 2.384±0.00 N/A 24.973±15.56 1.986±0.00 5.659±0.00 3.822±2.99 3.508±0.00 5.549±0.00 4.320±3.40 2.258±0.00 3.644±1.02 5.694±0.26 4.115±0.00
ENST00000588201 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589543 2.333±0.00 3.190±0.00 N/A N/A 1.779±0.89 N/A N/A N/A N/A N/A N/A 7.253±1.36 8.323±0.00 4.758±0.00
ENST00000590198 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591292 N/A 0.863±0.00 N/A N/A 0.394±0.09 N/A 0.547±0.00 1.600±0.00 N/A N/A N/A 1.372±0.53 N/A 0.978±0.00
ENST00000591392 N/A 5.474±0.00 1.300±0.00 N/A 3.765±0.00 10.180±0.00 8.268±0.00 5.865±0.00 N/A N/A 2.755±0.00 N/A N/A 5.365±0.00
ENST00000592019 N/A N/A N/A N/A N/A N/A N/A N/A 4.537±0.00 N/A N/A 7.359±0.00 9.873±0.00 N/A
ENST00000592112 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000140623 ENST00000268231 N/A N/A N/A 0.216±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.758±0.00
ENST00000396693 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.037±0.00 N/A N/A 46.267±18.26
ENST00000587603 0.025±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 45.535±0.00
ENST00000588241 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590303 0.114±0.00 0.633±0.00 N/A 0.489±0.00 N/A N/A N/A N/A 0.144±0.00 N/A N/A N/A N/A N/A
ENST00000590741 0.088±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 34.849±0.00
ENST00000591624 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591861 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000267077 ENST00000592465 N/A N/A N/A 0.829±0.00 1.883±0.00 4.764±0.00 0.173±0.00 1.802±0.00 0.087±0.00 N/A N/A 0.877±0.00 0.356±0.00 N/A
ENSG00000267795 ENST00000586005 N/A N/A N/A N/A 3.410±0.00 15.005±0.00 N/A 3.834±0.00 N/A 7.972±0.00 N/A 9.082±4.38 3.492±2.02 N/A
ENST00000586440 N/A N/A N/A 0.329±0.00 N/A N/A 0.223±0.14 N/A N/A N/A N/A N/A 0.429±0.00 N/A
ENST00000588500 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588606 N/A N/A N/A N/A 8.611±4.21 25.999±0.00 N/A 6.930±0.00 3.889±0.00 8.772±6.18 N/A 8.854±3.20 8.001±0.00 N/A
ENST00000588894 N/A N/A N/A 1.358±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589327 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589721 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591004 N/A N/A N/A 0.326±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591870 0.215±0.00 N/A N/A N/A 1.717±0.00 15.447±0.00 0.161±0.00 N/A 0.072±0.00 N/A N/A N/A 2.315±0.00 N/A
ENST00000615471 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615889 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022540 ENSMUST00000023191 5.298±2.78 12.309±0.00 15.560±1.93 15.023±8.82 18.931±10.94 9.387±7.97 N/A 49.453±30.44 20.059±5.09 14.451±4.70 N/A 6.418±5.16 11.603±0.86 43.937±24.55
ENSMUST00000090453 N/A N/A 6.927±0.80 31.967±19.56 N/A N/A N/A N/A 10.327±3.32 N/A N/A 12.982±6.40 8.348±2.32 N/A
ENSMUSG00000096215 ENSMUST00000178155 0.903±0.26 N/A 8.033±1.06 0.228±0.07 4.473±0.00 17.616±3.73 N/A N/A 2.118±0.77 7.492±0.00 N/A 5.245±3.04 6.020±0.57 0.607±0.00
ENSMUST00000183381 0.277±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183477 N/A N/A N/A N/A 5.427±0.29 N/A N/A N/A 2.385±0.09 N/A N/A 9.566±3.67 1.076±0.00 N/A
ENSMUST00000183631 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183821 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.214±0.05
ENSMUST00000184256 N/A N/A N/A 0.308±0.00 1.821±0.30 18.421±4.78 0.348±0.00 N/A 1.452±0.00 6.102±0.84 N/A 3.395±0.96 N/A 0.227±0.00
ENSMUST00000184439 0.206±0.00 0.244±0.00 N/A 0.129±0.00 3.151±0.79 22.870±2.54 N/A 25.722±3.40 2.851±0.95 9.850±1.60 N/A 6.281±3.81 0.713±0.13 N/A
ENSMUST00000185147 6.161±0.08 0.310±0.07 25.874±4.18 0.276±0.16 3.892±1.77 57.533±9.72 0.619±0.37 50.866±13.32 7.399±3.59 21.071±2.47 N/A 10.539±3.99 13.761±9.25 0.926±0.64

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