C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: small integral membrane protein 22
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000096215 Smim22 10090 + 16:5007288-5008309 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000178155 Smim22-001 5007337-5008309 protein_coding
  ENSMUST00000183381 Smim22-006 5007352-5008309 processed_transcript
  ENSMUST00000183477 Smim22-007 5007359-5008309 processed_transcript
  ENSMUST00000183631 Smim22-008 5007768-5008309 retained_intron
  ENSMUST00000183821 Smim22-003 5007316-5008042 retained_intron
  ENSMUST00000184256 Smim22-009 5007352-5008306 protein_coding
  ENSMUST00000184439 Smim22-002 5007288-5008306 protein_coding
  ENSMUST00000185147 Smim22-004 5007352-5008309 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000178155ENSMUST00000183381ENSMUST00000183477ENSMUST00000183821ENSMUST00000184256ENSMUST00000184439ENSMUST00000185147
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000178155 0.903±0.26 N/A 8.033±1.06 0.228±0.07 4.473±0.00 17.616±3.73 N/A N/A 2.118±0.77 7.492±0.00 5.245±3.04 6.020±0.57 0.607±0.00
ENSMUST00000183381 0.277±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183477 N/A N/A N/A N/A 5.427±0.29 N/A N/A N/A 2.385±0.09 N/A 9.566±3.67 1.076±0.00 N/A
ENSMUST00000183821 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.214±0.05
ENSMUST00000184256 N/A N/A N/A 0.308±0.00 1.821±0.30 18.421±4.78 0.348±0.00 N/A 1.452±0.00 6.102±0.84 3.395±0.96 N/A 0.227±0.00
ENSMUST00000184439 0.206±0.00 0.244±0.00 N/A 0.129±0.00 3.151±0.79 22.870±2.54 N/A 25.722±3.40 2.851±0.95 9.850±1.60 6.281±3.81 0.713±0.13 N/A
ENSMUST00000185147 6.161±0.08 0.310±0.07 25.874±4.18 0.276±0.16 3.892±1.77 57.533±9.72 0.619±0.37 50.866±13.32 7.399±3.59 21.071±2.47 10.539±3.99 13.761±9.25 0.926±0.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00004Y CIL_00004Y_0002 CGP 16:4986858-5008309
CIL_00004V CIL_00004V_0002 CGP 16:5007288-5013517

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000096427 SMIM22 small integral membrane protein 22 protein_coding Danio_rerio
ENSG00000267795 SMIM22 small integral membrane protein 22 protein_coding Homo_sapiens

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