C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000277559 RP11-434E6.4 9606 + 16:54290965-54292422 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000616682 RP11-434E6.4-001 54290965-54292422 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000616682
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000616682 0.220±0.00 0.241±0.00 0.180±0.00 0.217±0.00 0.011±0.00 0.069±0.00 0.233±0.00 0.032±0.00 0.156±0.00 0.011±0.00 0.538±0.16 0.145±0.07 0.215±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ON CIL_0007ON_0002 UCNEbase 16:51906374-55391377
CIL_0007S8 CIL_0007S8_0001 VISTA 16:53758702-54360209
CIL_000856 CIL_000856_0001 VISTA 16:53798739-54400045
CIL_0007S7 CIL_0007S7_0001 VISTA 16:53805894-54406356
CIL_0007S6 CIL_0007S6_0001 VISTA 16:53809942-54410955
CIL_000857 CIL_000857_0001 VISTA 16:53915682-54517241
CIL_0007S5 CIL_0007S5_0001 VISTA 16:53989508-54590424
CIL_0007S4 CIL_0007S4_0001 VISTA 16:54016433-54617773
CIL_00080I CIL_00080I_0001 VISTA 16:54051107-54651727
CIL_00080Q CIL_00080Q_0001 VISTA 16:54189263-54790155
CIL_00080P CIL_00080P_0001 VISTA 16:54206390-54807534
CIL_00080L CIL_00080L_0001 VISTA 16:54241966-54844013
CIL_00080M CIL_00080M_0001 VISTA 16:54245814-54846743
CIL_00080N CIL_00080N_0001 VISTA 16:54277555-54878525
CIL_00080R CIL_00080R_0001 VISTA 16:54282300-54883125
CIL_0006IA CIL_0006IA_0001 CGP 16:54283304-54934485
CIL_0008KP CIL_0008KP_0001 VISTA 16:54285069-54886352
CIL_0008ZH CIL_0008ZH_0001 VISTA 16:54290592-54891598

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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