C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Gene Info | |||||
|---|---|---|---|---|---|
| Description: | TAR DNA binding protein, isoform CRA_d {ECO:0000313|EMBL:EAW71673.1}; TAR DNA-binding protein 43 {ECO:0000313|Ensembl:ENSP000004 | ||||
| Gene Accession | Gene Name | Tax ID | Strand | Position | Gene Biotype |
ENSG00000277726  |
TARDBP | 9606 | + |
1:11012662-11030528  |
protein_coding |
| Transcript Accession | Transcript Name | Position | Transcript Biotype | ||
| ENST00000611136 |
TARDBP-002 | 11020506-11030430 | nonsense_mediated_decay | ||
| ENST00000612542 |
TARDBP-003 | 11022144-11030526 | protein_coding | ||
| ENST00000614757 |
TARDBP-001 | 11012662-11030528 | nonsense_mediated_decay | ||
| ENST00000620028 |
TARDBP-005 | 11024793-11030525 | processed_transcript | ||
| ENST00000622108 |
TARDBP-004 | 11023198-11030497 | nonsense_mediated_decay | ||
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00082Y | CIL_00082Y_0001 | VISTA | 1:10421182-11021687 |
| CIL_0008S2 | CIL_0008S2_0001 | VISTA | 1:10435049-11039184 |
| CIL_0008RU | CIL_0008RU_0001 | VISTA | 1:10491513-11092116 |
| CIL_0008JG | CIL_0008JG_0001 | VISTA | 1:10565145-11165671 |
| CIL_0008JY | CIL_0008JY_0001 | VISTA | 1:10605072-11206087 |
| CIL_00019T | CIL_00019T_0002 | CGP | 1:10946471-11026420 |
Gene Ontology |
||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000166 | IEA | nucleotide binding |
| GO:0003676 | IEA | nucleic acid binding |
Homologs | |||||
| No Homologs available. | |||||
|---|---|---|---|---|---|
