C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transforming growth factor beta regulated gene 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000000394 Tbrg4-007 ENSMUSG00000000384 10090 - 11:6616423-6626043 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000000394
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000000394 7.966±2.22 10.465±3.04 4.291±0.00 7.833±4.44 9.526±2.10 21.542±4.62 12.681±3.25 7.250±1.73 12.781±5.97 4.553±1.14 3.524±0.87 10.936±2.19 11.289±6.97 6.494±0.78

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00072M CIL_00072M_0003 CGP 11:6597823-6626067

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004672 IEA protein kinase activity
GO:0005739 IDA mitochondrion
GO:0006468 IEA protein phosphorylation
GO:0045333 ISS cellular respiration

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258770 TBRG4-003 protein_coding Homo_sapiens 0 1325
ENST00000461363 TBRG4-011 protein_coding Homo_sapiens 0 499
ENST00000478532 TBRG4-007 protein_coding Homo_sapiens 0 514
ENST00000484326 TBRG4-015 retained_intron Homo_sapiens 0 398
ENST00000488222 TBRG4-014 retained_intron Homo_sapiens 0 623
ENST00000494076 TBRG4-004 protein_coding Homo_sapiens 0 1325
ENST00000495973 TBRG4-006 retained_intron Homo_sapiens 0 1273

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