C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: myosin XVIIIA
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000000631 Myo18a 10090 + 11:77763246-77865980 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000000645 Myo18a-201 77777265-77865980 protein_coding
  ENSMUST00000092884 Myo18a-018 77801375-77864837 protein_coding
  ENSMUST00000092887 Myo18a-202 77777265-77865980 protein_coding
  ENSMUST00000100443 Myo18a-019 77840933-77844878 retained_intron
  ENSMUST00000100794 Myo18a-004 77801298-77865837 protein_coding
  ENSMUST00000100795 Myo18a-014 77763301-77780195 retained_intron
  ENSMUST00000102488 Myo18a-001 77772151-77865980 protein_coding
  ENSMUST00000108375 Myo18a-002 77763246-77865980 protein_coding
  ENSMUST00000108376 Myo18a-003 77766736-77865980 protein_coding
  ENSMUST00000130305 Myo18a-006 77801350-77865109 protein_coding
  ENSMUST00000130627 Myo18a-022 77777316-77864848 protein_coding
  ENSMUST00000130956 Myo18a-008 77850656-77853325 retained_intron
  ENSMUST00000133740 Myo18a-012 77860287-77865195 processed_transcript
  ENSMUST00000134196 Myo18a-007 77838087-77841568 processed_transcript
  ENSMUST00000135045 Myo18a-009 77849451-77853454 retained_intron
  ENSMUST00000135375 Myo18a-011 77853864-77859362 protein_coding
  ENSMUST00000142571 Myo18a-010 77857479-77865076 retained_intron
  ENSMUST00000151373 Myo18a-020 77801337-77812569 protein_coding
  ENSMUST00000154892 Myo18a-013 77824554-77827641 processed_transcript
  ENSMUST00000164315 Myo18a-021 77765603-77777406 protein_coding
  ENSMUST00000164334 Myo18a-023 77801375-77865056 protein_coding
  ENSMUST00000167856 Myo18a-017 77811515-77865980 protein_coding
  ENSMUST00000168348 Myo18a-016 77777293-77865142 protein_coding
  ENSMUST00000169105 Myo18a-005 77777293-77865143 protein_coding
  ENSMUST00000172303 Myo18a-015 77801350-77865980 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000000645ENSMUST00000092887ENSMUST00000100794ENSMUST00000108375ENSMUST00000130305ENSMUST00000130627ENSMUST00000133740ENSMUST00000167856ENSMUST00000169105ENSMUST00000172303
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000000645 N/A N/A N/A 12.774±0.00 2.208±0.56 N/A N/A N/A 2.507±0.00 N/A N/A 8.611±3.21 N/A 7.072±0.00
ENSMUST00000092887 2.657±1.02 5.448±0.69 1.580±0.56 8.583±2.31 3.622±1.33 18.268±1.43 N/A 13.616±1.33 4.372±1.63 10.834±2.01 N/A 6.141±1.83 11.174±5.83 2.534±0.08
ENSMUST00000100794 1.110±0.22 3.145±0.44 1.549±0.00 N/A 2.327±0.34 4.746±0.00 3.003±0.00 N/A 1.216±0.28 3.647±0.11 7.601±0.00 3.843±1.26 2.601±0.20 1.118±0.08
ENSMUST00000108375 1.442±0.64 4.874±2.26 2.182±0.43 3.502±0.00 1.920±0.16 N/A 3.764±0.78 3.023±0.23 2.368±0.51 4.453±0.92 N/A 3.274±1.31 11.398±6.73 N/A
ENSMUST00000130305 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.293±0.00 N/A N/A
ENSMUST00000130627 N/A N/A N/A N/A 1.077±0.00 N/A N/A N/A N/A N/A N/A 12.462±0.00 37.023±22.72 N/A
ENSMUST00000133740 N/A N/A N/A N/A N/A N/A 42.481±4.73 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167856 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.323±0.00 N/A N/A N/A
ENSMUST00000169105 N/A N/A N/A 17.830±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.653±0.00
ENSMUST00000172303 1.207±0.00 4.016±0.51 3.357±0.33 5.557±1.10 4.599±2.18 7.097±1.04 9.633±1.34 5.884±1.68 1.919±0.58 4.693±0.00 13.822±3.37 3.530±0.85 1.991±0.00 1.212±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 ISS Golgi membrane
GO:0003774 IEA motor activity
GO:0005524 IEA ATP binding
GO:0005802 ISS trans-Golgi network
GO:0005856 IDA cytoskeleton
GO:0007030 ISS Golgi organization
GO:0008152 IEA metabolic process
GO:0016020 IEA membrane
GO:0016459 IEA myosin complex
GO:0016477 ISS cell migration
GO:0031032 ISS actomyosin structure organization
GO:0042641 IEA actomyosin
GO:0043531 ISS ADP binding
GO:0044822 IEA poly(A) RNA binding
GO:0048194 ISS Golgi vesicle budding
GO:0050714 ISS positive regulation of protein secretion
GO:0051015 IEA actin filament binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061862 myo18ab myosin XVIIIAb protein_coding Danio_rerio
ENSDARG00000075752 myo18aa myosin XVIIIAa protein_coding Danio_rerio
ENSG00000196535 MYO18A myosin XVIIIA protein_coding Homo_sapiens

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