C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin XVIIIA
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000100794 Myo18a-004 ENSMUSG00000000631 10090 + 11:77801298-77865837 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000100794
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000100794 1.110±0.22 3.145±0.44 1.549±0.00 2.327±0.34 4.746±0.00 3.003±0.00 1.216±0.28 3.647±0.11 7.601±0.00 3.843±1.26 2.601±0.20 1.118±0.08

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003774 IEA motor activity
GO:0005524 IEA ATP binding
GO:0005856 IDA cytoskeleton
GO:0008152 IEA metabolic process
GO:0016459 IEA myosin complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000153951 myo18ab-001 protein_coding Danio_rerio 0 1546
ENSDART00000088648 myo18ab-201 protein_coding Danio_rerio 0 1537
ENST00000359450 TIAF1-001 protein_coding Homo_sapiens 0 366
ENST00000527372 MYO18A-001 protein_coding Homo_sapiens 0 5884
ENST00000528322 MYO18A-012 retained_intron Homo_sapiens 0 267
ENST00000528564 MYO18A-008 protein_coding Homo_sapiens 0 555
ENST00000529578 MYO18A-006 processed_transcript Homo_sapiens 0 1315
ENST00000529889 MYO18A-017 retained_intron Homo_sapiens 0 623
ENST00000530254 MYO18A-026 nonsense_mediated_decay Homo_sapiens 0 6414
ENST00000530557 MYO18A-014 retained_intron Homo_sapiens 0 793
ENST00000531253 MYO18A-002 protein_coding Homo_sapiens 0 6414
ENST00000531267 MYO18A-011 processed_transcript Homo_sapiens 0 206
ENST00000531438 MYO18A-021 retained_intron Homo_sapiens 0 403
ENST00000531892 MYO18A-018 processed_transcript Homo_sapiens 0 516
ENST00000532143 MYO18A-023 retained_intron Homo_sapiens 0 712
ENST00000532867 MYO18A-020 processed_transcript Homo_sapiens 2e-33 145
ENST00000533112 MYO18A-003 protein_coding Homo_sapiens 0 4449
ENST00000533420 MYO18A-010 processed_transcript Homo_sapiens 1e-27 126
ENST00000546105 MYO18A-016 processed_transcript Homo_sapiens 0 1125
ENST00000585573 MYO18A-034 processed_transcript Homo_sapiens 0 207
ENST00000588791 MYO18A-036 nonsense_mediated_decay Homo_sapiens 0 732
ENST00000590242 MYO18A-035 processed_transcript Homo_sapiens 0 717

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