C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interleukin 16
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000145610 Il16-003 ENSMUSG00000001741 10090 - 7:83642848-83655495 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleOvaryENSMUST00000145610
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary
ENSMUST00000145610 3.990±0.77 1.658±0.19 0.648±0.00 15.711±3.57 2.098±0.29 2.063±0.33 3.448±1.77 4.456±0.44 0.862±0.67 2.024±0.78

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009CN CIL_0009CN_0002 VISTA 7:83511918-84115428

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000302987 IL16-003 protein_coding Homo_sapiens 0 1615
ENST00000360547 IL16-009 nonsense_mediated_decay Homo_sapiens 0 1672
ENST00000394652 IL16-002 protein_coding Homo_sapiens 0 1694
ENST00000394660 IL16-001 protein_coding Homo_sapiens 0 1674
ENST00000558332 IL16-005 protein_coding Homo_sapiens 0 1382
ENST00000558857 IL16-004 nonsense_mediated_decay Homo_sapiens 0 1400
ENST00000559342 IL16-014 processed_transcript Homo_sapiens 0 466
ENST00000559388 IL16-201 protein_coding Homo_sapiens 0 1613
ENST00000559953 IL16-015 retained_intron Homo_sapiens 0 390
ENST00000560115 IL16-013 nonsense_mediated_decay Homo_sapiens 0 1483
ENST00000560230 IL16-016 processed_transcript Homo_sapiens 0 291

Loading