C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interleukin 16
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000001792 Il16-001 ENSMUSG00000001741 10090 - 7:83643064-83735523 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartLungMuscleOvaryTestisENSMUST00000001792
Transcript ID Adipose Bladder Brain Breast Colon Heart Lung Muscle Ovary Testis
ENSMUST00000001792 1.124±0.00 2.086±0.45 0.186±0.00 1.957±0.05 0.841±0.00 0.478±0.05 1.189±0.00 0.308±0.10 1.465±0.34 0.221±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009CN CIL_0009CN_0002 VISTA 7:83511918-84115428

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005125 IDA cytokine activity
GO:0005515 IPI protein binding
GO:0005615 IEA extracellular space
GO:0005622 IDA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0030595 IDA leukocyte chemotaxis
GO:0050930 IDA induction of positive chemotaxis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000302987 IL16-003 protein_coding Homo_sapiens 0 3391
ENST00000360547 IL16-009 nonsense_mediated_decay Homo_sapiens 0 2034
ENST00000394652 IL16-002 protein_coding Homo_sapiens 0 1672
ENST00000394660 IL16-001 protein_coding Homo_sapiens 0 3507
ENST00000558332 IL16-005 protein_coding Homo_sapiens 0 1382
ENST00000558857 IL16-004 nonsense_mediated_decay Homo_sapiens 0 1400
ENST00000559342 IL16-014 processed_transcript Homo_sapiens 0 466
ENST00000559383 IL16-006 protein_coding Homo_sapiens 0 1733
ENST00000559388 IL16-201 protein_coding Homo_sapiens 0 1613
ENST00000559953 IL16-015 retained_intron Homo_sapiens 0 390
ENST00000560115 IL16-013 nonsense_mediated_decay Homo_sapiens 0 1485
ENST00000560230 IL16-016 processed_transcript Homo_sapiens 0 291
ENST00000560241 IL16-007 nonsense_mediated_decay Homo_sapiens 0 1376

Loading