C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Von Willebrand factor homolog
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000001930 Vwf 10090 + 6:125546774-125686679 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000001995 Vwf-201 125552963-125686677 protein_coding
  ENSMUST00000100941 Vwf-004 125546774-125592174 protein_coding
  ENSMUST00000112253 Vwf-002 125552963-125592471 protein_coding
  ENSMUST00000112254 Vwf-001 125552948-125686679 protein_coding
  ENSMUST00000126709 Vwf-005 125566251-125578578 processed_transcript
  ENSMUST00000129436 Vwf-010 125654931-125656627 retained_intron
  ENSMUST00000134073 Vwf-007 125603550-125642924 processed_transcript
  ENSMUST00000139678 Vwf-009 125634348-125636662 retained_intron
  ENSMUST00000141521 Vwf-008 125646339-125661967 retained_intron
  ENSMUST00000146264 Vwf-006 125685737-125686635 processed_transcript
  ENSMUST00000147101 Vwf-011 125649269-125686672 nonsense_mediated_decay
  ENSMUST00000150548 Vwf-003 125552963-125604776 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000001995ENSMUST00000112254ENSMUST00000139678ENSMUST00000146264ENSMUST00000147101
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000001995 6.437±1.95 0.872±0.48 3.693±1.59 0.636±0.34 6.166±2.01 2.960±0.16 4.697±1.52 0.735±0.31 0.589±0.19 33.671±1.21 2.407±0.19 3.944±1.37 1.725±1.44 1.037±0.36
ENSMUST00000112254 4.931±0.00 0.574±0.20 N/A 0.461±0.00 3.707±0.00 N/A 4.198±1.55 0.837±0.42 0.816±0.34 15.274±1.86 N/A 3.363±1.67 0.627±0.20 1.358±0.19
ENSMUST00000139678 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.735±1.00 N/A N/A
ENSMUST00000146264 N/A 11.976±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 28.882±0.77 N/A N/A
ENSMUST00000147101 9.883±5.91 0.922±0.14 8.316±1.52 1.553±0.65 5.449±0.99 3.188±0.53 5.636±1.12 1.095±0.39 1.954±0.94 26.796±2.61 2.532±0.69 4.224±1.22 2.359±0.94 1.709±0.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006C4 CIL_0006C4_0002 CGP 6:125460266-125686679

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001889 IMP liver development
GO:0001890 IMP placenta development
GO:0001948 ISS glycoprotein binding
GO:0002020 ISS protease binding
GO:0005178 ISS integrin binding
GO:0005515 IPI protein binding
GO:0005518 ISS collagen binding
GO:0005576 ISS extracellular region
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005783 ISS endoplasmic reticulum
GO:0007155 ISS cell adhesion
GO:0007596 ISS blood coagulation
GO:0007599 ISS hemostasis
GO:0009897 IDA external side of plasma membrane
GO:0019865 ISS immunoglobulin binding
GO:0030168 ISS platelet activation
GO:0031012 ISS extracellular matrix
GO:0031589 ISS cell-substrate adhesion
GO:0033093 ISS Weibel-Palade body
GO:0042802 IEA identical protein binding
GO:0042803 ISS protein homodimerization activity
GO:0047485 ISS protein N-terminus binding
GO:0051087 ISS chaperone binding
GO:0051260 ISS protein homooligomerization
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077231 vwf von Willebrand factor protein_coding Danio_rerio
ENSG00000110799 VWF von Willebrand factor protein_coding Homo_sapiens

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