C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Von Willebrand factor homolog
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000001995 Vwf-201 ENSMUSG00000001930 10090 + 6:125552963-125686677 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000001995
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000001995 6.437±1.95 0.872±0.48 3.693±1.59 0.636±0.34 6.166±2.01 2.960±0.16 4.697±1.52 0.735±0.31 0.589±0.19 33.671±1.21 2.407±0.19 3.944±1.37 1.725±1.44 1.037±0.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006C4 CIL_0006C4_0002 CGP 6:125460266-125686679

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001889 IMP liver development
GO:0001890 IMP placenta development
GO:0001948 ISS glycoprotein binding
GO:0002020 ISS protease binding
GO:0005178 ISS integrin binding
GO:0005515 IPI protein binding
GO:0005518 ISS collagen binding
GO:0005576 ISS extracellular region
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005783 ISS endoplasmic reticulum
GO:0007155 ISS cell adhesion
GO:0007596 ISS blood coagulation
GO:0007599 ISS hemostasis
GO:0009897 IDA external side of plasma membrane
GO:0019865 ISS immunoglobulin binding
GO:0030168 ISS platelet activation
GO:0031012 ISS extracellular matrix
GO:0031589 ISS cell-substrate adhesion
GO:0033093 ISS Weibel-Palade body
GO:0042802 IEA identical protein binding
GO:0042803 ISS protein homodimerization activity
GO:0047485 ISS protein N-terminus binding
GO:0051087 ISS chaperone binding
GO:0051260 ISS protein homooligomerization
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261405 VWF-002 protein_coding Homo_sapiens 0 8065
ENST00000457911 VWFP1-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 2549

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