C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: proteasome (prosome, macropain) 26S subunit, ATPase 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000002102 Psmc3 10090 + 2:91054009-91066369 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000002171 Psmc3-009 91054055-91066369 protein_coding
  ENSMUST00000067663 Psmc3-001 91054009-91059432 protein_coding
  ENSMUST00000111441 Psmc3-002 91054100-91059432 protein_coding
  ENSMUST00000131473 Psmc3-004 91054478-91055553 processed_transcript
  ENSMUST00000141462 Psmc3-003 91054382-91055718 processed_transcript
  ENSMUST00000145317 Psmc3-008 91058109-91059434 processed_transcript
  ENSMUST00000146506 Psmc3-007 91054301-91056996 nonsense_mediated_decay
  ENSMUST00000151419 Psmc3-006 91054573-91055928 processed_transcript
  ENSMUST00000152269 Psmc3-005 91054095-91055935 processed_transcript
  ENSMUST00000185715 Psmc3-010 91054278-91057845 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000067663ENSMUST00000111441ENSMUST00000131473ENSMUST00000141462ENSMUST00000185715
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000067663 42.198±5.36 16.751±0.05 75.107±6.79 66.372±6.94 27.406±4.17 35.926±5.05 43.302±9.35 43.734±11.39 75.399±40.19 37.266±5.20 80.377±8.35 32.302±15.38 70.463±25.75 240.659±82.49
ENSMUST00000111441 16.479±2.04 30.594±5.39 N/A 20.452±0.00 14.884±0.84 N/A 11.262±0.00 N/A N/A N/A N/A 43.792±6.08 33.124±15.02 299.203±0.00
ENSMUST00000131473 N/A N/A N/A 91.263±0.00 N/A N/A N/A N/A N/A N/A N/A 131.296±0.00 192.903±0.00 414.583±0.00
ENSMUST00000141462 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 131.646±0.00 N/A N/A
ENSMUST00000185715 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 49.191±0.41 46.809±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000502 IEA proteasome complex
GO:0000932 IDA cytoplasmic mRNA processing body
GO:0001824 IMP blastocyst development
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0016020 IEA membrane
GO:0016787 IEA hydrolase activity
GO:0022624 IDA proteasome accessory complex
GO:0030163 IEA protein catabolic process
GO:0048471 IEA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007141 psmc3 proteasome (prosome, macropain) 26S subunit, ATPase, 3 protein_coding Danio_rerio
ENSG00000165916 PSMC3 proteasome (prosome, macropain) 26S subunit, ATPase, 3 protein_coding Homo_sapiens

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