C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) 26S subunit, ATPase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111441 Psmc3-002 ENSMUSG00000002102 10090 + 2:91054100-91059432 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartOvaryPlacentaTestisENSMUST00000111441
Transcript ID Adipose Adrenal Brain Breast Heart Ovary Placenta Testis
ENSMUST00000111441 16.479±2.04 30.594±5.39 20.452±0.00 14.884±0.84 11.262±0.00 43.792±6.08 33.124±15.02 299.203±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001824 IMP blastocyst development
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0016787 IEA hydrolase activity
GO:0030163 IEA protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000007913 psmc3-201 protein_coding Danio_rerio 0 939
ENST00000298852 PSMC3-001 protein_coding Homo_sapiens 0 1332
ENST00000441073 RP11-296P7.4-001 processed_pseudogene Homo_sapiens 0 946
ENST00000524447 PSMC3-011 protein_coding Homo_sapiens 0 346
ENST00000526993 PSMC3-004 protein_coding Homo_sapiens 0 346
ENST00000527906 PSMC3-006 nonsense_mediated_decay Homo_sapiens 0 492
ENST00000528362 PSMC3-008 retained_intron Homo_sapiens 0 193
ENST00000529500 PSMC3-003 retained_intron Homo_sapiens 0 200
ENST00000530651 PSMC3-005 protein_coding Homo_sapiens 0 758
ENST00000530887 PSMC3-007 nonsense_mediated_decay Homo_sapiens 0 758
ENST00000530912 PSMC3-002 protein_coding Homo_sapiens 0 1554
ENST00000531051 PSMC3-010 protein_coding Homo_sapiens 0 532
ENST00000531653 PSMC3-009 retained_intron Homo_sapiens 0 206
ENST00000602866 PSMC3-012 protein_coding Homo_sapiens 0 1332
ENST00000619920 PSMC3-201 protein_coding Homo_sapiens 0 1332

Loading