C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) 26S subunit, ATPase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000067663 Psmc3-001 ENSMUSG00000002102 10090 + 2:91054009-91059432 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000067663
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000067663 42.198±5.36 16.751±0.05 75.107±6.79 66.372±6.94 27.406±4.17 35.926±5.05 43.302±9.35 43.734±11.39 75.399±40.19 37.266±5.20 80.377±8.35 32.302±15.38 70.463±25.75 240.659±82.49

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000502 IEA proteasome complex
GO:0000932 IDA cytoplasmic mRNA processing body
GO:0001824 IMP blastocyst development
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0016020 IEA membrane
GO:0016787 IEA hydrolase activity
GO:0022624 IDA proteasome accessory complex
GO:0030163 IEA protein catabolic process
GO:0048471 IEA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000007913 psmc3-201 protein_coding Danio_rerio 0 1123
ENST00000298852 PSMC3-001 protein_coding Homo_sapiens 0 1742
ENST00000441073 RP11-296P7.4-001 processed_pseudogene Homo_sapiens 0 1223
ENST00000524447 PSMC3-011 protein_coding Homo_sapiens 0 673
ENST00000526993 PSMC3-004 protein_coding Homo_sapiens 0 651
ENST00000527906 PSMC3-006 nonsense_mediated_decay Homo_sapiens 0 848
ENST00000528362 PSMC3-008 retained_intron Homo_sapiens 0 514
ENST00000529500 PSMC3-003 retained_intron Homo_sapiens 0 200
ENST00000530651 PSMC3-005 protein_coding Homo_sapiens 0 1057
ENST00000530887 PSMC3-007 nonsense_mediated_decay Homo_sapiens 0 1061
ENST00000530912 PSMC3-002 protein_coding Homo_sapiens 0 1332
ENST00000531051 PSMC3-010 protein_coding Homo_sapiens 0 532
ENST00000531653 PSMC3-009 retained_intron Homo_sapiens 0 617
ENST00000602866 PSMC3-012 protein_coding Homo_sapiens 0 1720
ENST00000619920 PSMC3-201 protein_coding Homo_sapiens 0 1742

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