C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0000U6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000068019-ENSDARG00000075313 CGP 7955 12:1282667-1337149
GeneTranscriptPositionBiotype
ENSDARG00000068019 (sox8a)
SRY (sex determining region Y)-box 8a
ENSDART00000098117 (sox8a-201) 1282667-1290341 protein_coding
ENSDARG00000075313 (CABZ01073168.1)
Uncharacterized protein
ENSDART00000109523 (CABZ01073168.1-201) 1302572-1337149 protein_coding
CIL_0000U6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024176-ENSMUSG00000002279 CGP 10090 17:25565892-25662826
GeneTranscriptPositionBiotype
ENSMUSG00000002279 (Lmf1)
lipase maturation factor 1
ENSMUST00000063344 (Lmf1-201) 25579174-25662826 protein_coding
ENSMUST00000116641 (Lmf1-001) 25579177-25662826 protein_coding
ENSMUST00000126164 (Lmf1-006) 25579187-25598556 retained_intron
ENSMUST00000127280 (Lmf1-004) 25579199-25647596 retained_intron
ENSMUST00000128146 (Lmf1-005) 25579199-25634842 retained_intron
ENSMUST00000137201 (Lmf1-002) 25579187-25662723 nonsense_mediated_decay
ENSMUST00000141606 (Lmf1-008) 25655415-25656450 protein_coding
ENSMUST00000142264 (Lmf1-007) 25579199-25589224 retained_intron
ENSMUST00000154842 (Lmf1-003) 25579197-25654854 protein_coding
ENSMUST00000156868 (Lmf1-009) 25579320-25630682 processed_transcript
ENSMUSG00000024176 (Sox8)
SRY (sex determining region Y)-box 8
ENSMUST00000025003 (Sox8-001) 25565892-25570686 protein_coding
ENSMUST00000173447 (Sox8-002) 25568710-25570686 protein_coding
ENSMUST00000174560 (Sox8-003) 25567988-25570214 protein_coding
ENSMUSG00000091475 (2810468N07Rik)
RIKEN cDNA 2810468N07 gene
ENSMUST00000163493 (2810468N07Rik-001) 25570811-25575043 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000U6_0001ENSDARG00000068019ENSDART00000098117ENSDARG00000075313ENSDART00000109523CIL_0000U6_0002ENSMUSG00000002279ENSMUST00000063344ENSMUST00000116641ENSMUST00000126164ENSMUST00000127280ENSMUST00000128146ENSMUST00000137201ENSMUST00000141606ENSMUST00000142264ENSMUST00000154842ENSMUST00000156868ENSMUSG00000024176ENSMUST00000025003ENSMUST00000173447ENSMUST00000174560ENSMUSG00000091475ENSMUST00000163493
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000U6_0001ENSDARG00000068019ENSDART00000098117ENSDARG00000075313ENSDART00000109523CIL_0000U6_0002ENSMUSG00000002279ENSMUST00000063344ENSMUST00000116641ENSMUST00000137201ENSMUST00000156868ENSMUSG00000024176ENSMUST00000025003ENSMUST00000173447ENSMUST00000174560ENSMUSG00000091475ENSMUST00000163493
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000068019 ENSDART00000098117 N/A N/A N/A 0.439±0.00 N/A N/A 0.078±0.02 0.057±0.00 N/A N/A 0.217±0.00 N/A N/A N/A
ENSDARG00000075313 ENSDART00000109523 N/A N/A N/A 2.901±0.19 N/A N/A 8.825±0.55 7.837±0.00 2.194±0.00 N/A 2.393±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000002279 ENSMUST00000063344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.028±0.00 N/A
ENSMUST00000116641 6.909±3.50 11.010±2.08 6.186±1.34 4.087±0.58 6.144±1.85 7.455±0.92 5.086±1.04 9.760±2.44 7.653±4.05 4.641±0.54 2.073±0.57 7.102±2.65 6.023±2.66 27.220±10.02
ENSMUST00000126164 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127280 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128146 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137201 N/A N/A 1.507±0.00 1.776±0.00 N/A N/A 4.009±0.53 N/A N/A N/A 2.459±0.59 4.036±0.84 4.217±0.00 N/A
ENSMUST00000141606 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142264 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156868 N/A N/A N/A N/A 11.047±0.00 N/A N/A N/A N/A N/A N/A 5.319±0.00 N/A N/A
ENSMUSG00000024176 ENSMUST00000025003 0.315±0.09 0.580±0.19 0.414±0.10 7.227±2.96 0.963±0.51 0.668±0.29 0.193±0.06 0.351±0.04 0.041±0.04 0.232±0.03 0.175±0.05 1.665±0.82 1.409±1.71 3.124±0.80
ENSMUST00000173447 N/A 0.463±0.07 0.365±0.00 N/A 0.659±0.00 0.300±0.00 N/A N/A 0.026±0.01 N/A 0.097±0.00 1.385±0.00 N/A N/A
ENSMUST00000174560 N/A N/A N/A N/A N/A N/A N/A N/A 0.078±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000091475 ENSMUST00000163493 1.682±0.70 1.665±0.67 3.232±0.39 2.501±0.87 2.292±0.74 1.946±0.66 0.561±0.13 0.366±0.07 0.189±0.11 0.702±0.05 1.324±0.42 1.837±0.74 1.868±1.28 2.259±1.04

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