C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lipase maturation factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000116641 Lmf1-001 ENSMUSG00000002279 10090 + 17:25579177-25662826 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000116641
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000116641 6.909±3.50 11.010±2.08 6.186±1.34 4.087±0.58 6.144±1.85 7.455±0.92 5.086±1.04 9.760±2.44 7.653±4.05 4.641±0.54 2.073±0.57 7.102±2.65 6.023±2.66 27.220±10.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000U6 CIL_0000U6_0002 CGP 17:25565892-25662826

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005789 IDA endoplasmic reticulum membrane
GO:0006888 IMP ER to Golgi vesicle-mediated transport
GO:0009306 IMP protein secretion
GO:0016021 IEA integral component of membrane
GO:0033578 IMP protein glycosylation in Golgi
GO:0034382 IMP chylomicron remnant clearance
GO:0051006 IDA positive regulation of lipoprotein lipase activity
GO:0051604 IDA protein maturation
GO:0090181 IMP regulation of cholesterol metabolic process
GO:0090207 IMP regulation of triglyceride metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000109523 CABZ01073168.1-201 protein_coding Danio_rerio 0 255
ENST00000262301 LMF1-001 protein_coding Homo_sapiens 0 1249
ENST00000543238 LMF1-005 protein_coding Homo_sapiens 0 771
ENST00000545827 LMF1-003 nonsense_mediated_decay Homo_sapiens 0 942
ENST00000568897 LMF1-006 protein_coding Homo_sapiens 0 1201
ENST00000569516 LMF1-007 retained_intron Homo_sapiens 0 575
ENST00000570168 LMF1-017 processed_transcript Homo_sapiens 0 219

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