C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein kinase C substrate 80K-H
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000003402 Prkcsh 10090 + 9:22003035-22014219 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000003493 Prkcsh-201 22003035-22014219 protein_coding
  ENSMUST00000115331 Prkcsh-202 22003035-22014219 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000003493ENSMUST00000115331
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000003493 19.890±3.27 24.225±8.56 23.346±2.81 22.371±4.46 17.485±6.36 35.351±10.89 7.766±2.67 25.515±4.98 23.733±5.64 18.841±3.14 3.831±1.22 45.570±16.36 76.641±23.83 15.938±4.79
ENSMUST00000115331 9.936±0.92 61.719±32.18 14.139±0.11 16.097±2.34 6.149±1.66 8.284±3.08 3.669±1.90 8.767±0.69 13.209±6.39 5.786±1.35 2.916±1.06 17.984±8.89 33.115±10.88 4.666±1.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00016V CIL_00016V_0002 CGP 9:21989871-22014219
CIL_00016O CIL_00016O_0003 CGP 9:22003035-22052023

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001701 IMP in utero embryonic development
GO:0001889 IGI liver development
GO:0003723 IDA RNA binding
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005783 TAS endoplasmic reticulum
GO:0006491 TAS N-glycan processing
GO:0006807 IGI nitrogen compound metabolic process
GO:0010977 IMP negative regulation of neuron projection development
GO:0051291 IEA protein heterooligomerization
GO:0072001 IGI renal system development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004470 prkcsh protein kinase C substrate 80K-H protein_coding Danio_rerio
ENSG00000130175 PRKCSH protein kinase C substrate 80K-H protein_coding Homo_sapiens

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