C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: bicaudal D homolog 1 (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000003452 Bicd1 10090 + 6:149408984-149563329 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000003544 Bicd1-002 149409429-149556731 protein_coding
  ENSMUST00000086829 Bicd1-001 149408984-149563329 protein_coding
  ENSMUST00000111513 Bicd1-003 149409016-149557819 protein_coding
  ENSMUST00000130270 Bicd1-004 149409069-149497771 retained_intron
  ENSMUST00000140759 Bicd1-005 149549723-149558857 retained_intron
  ENSMUST00000172926 Bicd1-008 149516936-149520436 protein_coding
  ENSMUST00000173408 Bicd1-007 149409429-149556731 nonsense_mediated_decay
  ENSMUST00000174886 Bicd1-006 149513830-149519313 retained_intron

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000003544ENSMUST00000086829ENSMUST00000111513ENSMUST00000130270ENSMUST00000140759ENSMUST00000172926ENSMUST00000173408ENSMUST00000174886
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000003544 N/A N/A N/A N/A 0.073±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.210±0.06
ENSMUST00000086829 0.251±0.29 0.348±0.13 0.300±0.08 3.259±0.92 0.057±0.00 0.338±0.10 0.164±0.09 0.342±0.13 0.056±0.02 0.303±0.10 0.031±0.01 2.015±0.70 0.060±0.02 0.040±0.00
ENSMUST00000111513 0.214±0.20 0.782±0.00 N/A N/A 0.358±0.20 0.570±0.05 0.190±0.10 0.395±0.23 0.051±0.03 0.418±0.16 0.012±0.00 1.645±0.38 0.068±0.00 0.113±0.00
ENSMUST00000130270 N/A N/A N/A N/A N/A N/A N/A N/A 0.029±0.02 N/A N/A 2.175±0.00 N/A 0.113±0.03
ENSMUST00000140759 N/A N/A N/A N/A N/A N/A N/A N/A 0.036±0.00 N/A 0.025±0.00 N/A N/A N/A
ENSMUST00000172926 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.684±0.00 1.063±0.42 1.180±0.00
ENSMUST00000173408 N/A N/A N/A 6.525±0.00 N/A N/A N/A N/A N/A N/A 0.025±0.00 4.491±0.00 0.626±0.43 0.233±0.00
ENSMUST00000174886 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.948±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00017G CIL_00017G_0002 CGP 6:149309414-149563329

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005794 IEA Golgi apparatus
GO:0005802 IEA trans-Golgi network
GO:0005829 IEA cytosol
GO:0005881 IEA cytoplasmic microtubule
GO:0006810 IEA transport
GO:0008093 IEA cytoskeletal adaptor activity
GO:0016020 IEA membrane
GO:0016032 IEA viral process
GO:0017137 IEA Rab GTPase binding
GO:0031410 IEA cytoplasmic vesicle
GO:0031871 IPI proteinase activated receptor binding
GO:0033365 IEA protein localization to organelle
GO:0034063 IMP stress granule assembly
GO:0034452 IEA dynactin binding
GO:0045502 IEA dynein binding
GO:0048260 IEA positive regulation of receptor-mediated endocytosis
GO:0048471 IEA perinuclear region of cytoplasm
GO:0072385 IEA minus-end-directed organelle transport along microtubule
GO:0072393 IMP microtubule anchoring at microtubule organizing center
GO:0072517 IEA host cell viral assembly compartment
GO:1900275 IDA negative regulation of phospholipase C activity
GO:1900276 IDA regulation of proteinase activated receptor activity
GO:1900737 IDA negative regulation of phospholipase C-activating G-protein coupled receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074357 BICD1 (1 of 2) bicaudal D homolog 1 (Drosophila) protein_coding Danio_rerio
ENSDARG00000079496 bicd1a bicaudal D homolog 1a protein_coding Danio_rerio
ENSG00000151746 BICD1 bicaudal D homolog 1 (Drosophila) protein_coding Homo_sapiens

Loading