C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bicaudal D homolog 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000086829 Bicd1-001 ENSMUSG00000003452 10090 + 6:149408984-149563329 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000086829
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000086829 0.251±0.29 0.348±0.13 0.300±0.08 3.259±0.92 0.057±0.00 0.338±0.10 0.164±0.09 0.342±0.13 0.056±0.02 0.303±0.10 0.031±0.01 2.015±0.70 0.060±0.02 0.040±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00017G CIL_00017G_0002 CGP 6:149309414-149563329

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005802 IEA trans-Golgi network
GO:0005829 IEA cytosol
GO:0005881 IEA cytoplasmic microtubule
GO:0008093 IEA cytoskeletal adaptor activity
GO:0016020 IEA membrane
GO:0016032 IEA viral process
GO:0017137 IEA Rab GTPase binding
GO:0031410 IEA cytoplasmic vesicle
GO:0031871 IPI proteinase activated receptor binding
GO:0033365 IEA protein localization to organelle
GO:0034063 IMP stress granule assembly
GO:0034452 IEA dynactin binding
GO:0045502 IEA dynein binding
GO:0048260 IEA positive regulation of receptor-mediated endocytosis
GO:0048471 IEA perinuclear region of cytoplasm
GO:0072385 IEA minus-end-directed organelle transport along microtubule
GO:0072393 IMP microtubule anchoring at microtubule organizing center
GO:0072517 IEA host cell viral assembly compartment
GO:1900275 IDA negative regulation of phospholipase C activity
GO:1900276 IDA regulation of proteinase activated receptor activity
GO:1900737 IDA negative regulation of phospholipase C-activating G-protein coupled receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000281474 BICD1-002 protein_coding Homo_sapiens 0 3142
ENST00000395758 BICD1-003 nonsense_mediated_decay Homo_sapiens 0 3144
ENST00000548411 BICD1-001 protein_coding Homo_sapiens 0 4159
ENST00000552160 BICD1-004 protein_coding Homo_sapiens 0 547
ENST00000552226 BICD1-009 retained_intron Homo_sapiens 0 348
ENST00000614004 BICD1-010 retained_intron Homo_sapiens 7e-27 124

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