C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ets variant 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000004151 Etv1 10090 + 12:38779380-38868215 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000095767 Etv1-001 38780082-38868215 protein_coding
  ENSMUST00000159334 Etv1-002 38783509-38868203 protein_coding
  ENSMUST00000160244 Etv1-004 38779380-38866249 protein_coding
  ENSMUST00000160701 Etv1-007 38783481-38865961 protein_coding
  ENSMUST00000160856 Etv1-005 38780848-38865776 protein_coding
  ENSMUST00000160996 Etv1-012 38780349-38835258 protein_coding
  ENSMUST00000161164 Etv1-009 38780319-38781813 protein_coding
  ENSMUST00000161513 Etv1-010 38781129-38835170 protein_coding
  ENSMUST00000161591 Etv1-013 38837398-38865716 processed_transcript
  ENSMUST00000161980 Etv1-006 38783470-38866176 protein_coding
  ENSMUST00000162563 Etv1-003 38780284-38865779 protein_coding
  ENSMUST00000162730 Etv1-008 38781113-38867299 retained_intron
  ENSMUST00000163063 Etv1-011 38824681-38831216 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000095767ENSMUST00000159334ENSMUST00000160244ENSMUST00000160701ENSMUST00000160856ENSMUST00000160996ENSMUST00000161591ENSMUST00000161980ENSMUST00000162563ENSMUST00000162730
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000095767 0.522±0.00 1.744±0.26 0.687±0.01 1.014±0.15 0.422±0.10 0.805±0.00 0.462±0.10 0.535±0.12 0.060±0.03 0.440±0.02 0.405±0.06 0.319±0.00 0.050±0.00 0.045±0.00
ENSMUST00000159334 0.242±0.05 2.530±0.93 0.261±0.00 1.535±0.52 0.352±0.16 0.557±0.40 N/A 0.836±0.19 0.084±0.04 1.108±0.00 0.084±0.00 0.328±0.32 0.036±0.01 N/A
ENSMUST00000160244 0.174±0.07 2.566±0.58 N/A N/A 0.355±0.11 N/A 0.672±0.02 0.618±0.00 N/A 0.591±0.01 0.206±0.04 0.359±0.14 N/A 0.206±0.08
ENSMUST00000160701 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.157±0.00 N/A N/A
ENSMUST00000160856 0.110±0.00 N/A N/A N/A 0.611±0.27 N/A N/A N/A 0.111±0.00 N/A N/A 0.571±0.13 N/A 0.407±0.12
ENSMUST00000160996 0.692±0.00 N/A N/A N/A 0.916±0.00 0.923±0.00 N/A N/A 0.302±0.00 N/A N/A 0.723±0.21 0.090±0.00 0.429±0.04
ENSMUST00000161591 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.491±0.07 0.118±0.06 N/A
ENSMUST00000161980 0.404±0.16 5.923±1.72 N/A N/A 0.470±0.11 1.813±0.62 0.782±0.06 1.392±0.39 0.050±0.00 1.099±0.48 N/A 0.317±0.08 N/A 0.287±0.00
ENSMUST00000162563 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.339±0.00 0.368±0.07 N/A N/A
ENSMUST00000162730 0.147±0.00 1.274±0.00 N/A 0.564±0.00 0.420±0.21 0.780±0.32 0.278±0.00 N/A N/A 0.615±0.12 0.124±0.03 N/A 0.032±0.01 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007L8 CIL_0007L8_0002 UCNEbase 12:38397629-39342373

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000978 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0001077 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 IBA nucleus
GO:0006357 IBA regulation of transcription from RNA polymerase II promoter
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0007411 IMP axon guidance
GO:0007517 IMP muscle organ development
GO:0007638 IMP mechanosensory behavior
GO:0043565 IEA sequence-specific DNA binding
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055183 etv1 ets variant gene 1 protein_coding Danio_rerio
ENSG00000006468 ETV1 ets variant 1 protein_coding Homo_sapiens

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